ENST00000622259.4 SNX12

Information
Transcript ID
ENST00000622259.4
Genome
hg38
Position
chrX:71,056,332-71,068,448
Strand
-
CDS length
519
Amino acid length
173
Gene symbol
SNX12
Gene type
protein-coding
Gene description
sorting nexin 12
Gene Entrez Gene ID
29934
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
6 71,056,332 71,056,369
5 71,058,624 71,058,627
4 71,061,028 71,061,118
3 71,061,843 71,061,967
2 71,062,854 71,062,949
1 71,068,142 71,068,448
CDS
Exon number Type Start Stop
6 CDS 71,056,332 71,056,369
5 CDS 71,058,624 71,058,627
4 CDS 71,061,028 71,061,118
3 CDS 71,061,843 71,061,967
2 CDS 71,062,854 71,062,949
1 CDS 71,068,142 71,068,306
Other genome
Genome Chromosome Start End Links
hg19 chrX 70,276,182 70,288,298 Link
CDS sequence
ATGTCGGACACGGCAGTAGCTGATACCCGGCGCCTTAACTCGAAGCCGCAGGACCTGACCGACGCTTACGGGCCGCCAAGTAACTTCCTGGAGATCGACATCTTTAATCCTCAGACGGTGGGCGTGGGACGCGCGCGCTTCACCACCTATGAGGTTCGCATGCGGACAAACCTACCTATCTTCAAGCTAAAGGAGTCCTGCGTACGGCGGCGCTACAGTGACTTTGAGTGGCTGAAAAATGAGCTGGAGAGAGATAGCAAGATTGTAGTACCACCACTGCCTGGGAAAGCCTTGAAGCGGCAGCTCCCTTTCCGAGGAGATGAAGGGATCTTTGAGGAGTCTTTCATCGAAGAAAGGAGGCAGGGCCTCGAGCAGTTTATTAACAAAATTGCTGGGCACCCACTGGCTCAGAATGAACGCTGCCTACACATGTTCCTGCAAGAGGAGGCAATTGACAGGAACTACGTCCCGGGGAAGTCTTTCTCACAGTGTTGTCCAGGCTGGAGTGCAGTGGCGTGA
Amino sequence
MSDTAVADTRRLNSKPQDLTDAYGPPSNFLEIDIFNPQTVGVGRARFTTYEVRMRTNLPIFKLKESCVRRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLPFRGDEGIFEESFIEERRQGLEQFINKIAGHPLAQNERCLHMFLQEEAIDRNYVPGKSFSQCCPGWSAVA*