ENST00000379226.9 APOO

Information
Transcript ID
ENST00000379226.9
Genome
hg19
Position
chrX:23,851,470-23,926,055
Strand
-
CDS length
597
Amino acid length
199
Gene symbol
APOO
Gene type
protein-coding
Gene description
apolipoprotein O
Gene Entrez Gene ID
79135
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
9 23,851,470 23,851,729
8 23,858,430 23,858,494
7 23,874,419 23,874,499
6 23,876,759 23,876,850
5 23,886,710 23,886,805
4 23,892,520 23,892,574
3 23,897,032 23,897,151
2 23,898,962 23,899,069
1 23,925,811 23,926,055
CDS
Exon number Type Start Stop
8 CDS 23,858,459 23,858,494
7 CDS 23,874,419 23,874,499
6 CDS 23,876,759 23,876,850
5 CDS 23,886,710 23,886,805
4 CDS 23,892,520 23,892,574
3 CDS 23,897,032 23,897,151
2 CDS 23,898,962 23,899,069
1 CDS 23,925,811 23,925,819
Other genome
Genome Chromosome Start End Links
hg38 chrX 23,833,353 23,907,938 Link
CDS sequence
ATGTTCAAGGTAATTCAGAGGTCCGTGGGGCCAGCCAGCCTGAGCTTGCTCACCTTCAAAGTCTATGCAGCACCAAAAAAGGACTCACCTCCCAAAAATTCCGTGAAGGTTGATGAGCTTTCACTCTACTCAGTTCCTGAGGGTCAATCGAAGTATGTGGAGGAGGCAAGGAGCCAGCTTGAAGAAAGCATCTCACAGCTCCGACACTATTGCGAGCCATACACAACCTGGTGTCAGGAAACGTACTCCCAAACTAAGCCCAAGATGCAAAGTTTGGTTCAATGGGGGTTAGACAGCTATGACTATCTCCAAAATGCACCTCCTGGATTTTTTCCGAGACTTGGTGTTATTGGTTTTGCTGGCCTTATTGGACTCCTTTTGGCTAGAGGTTCAAAAATAAAGAAGCTAGTGTATCCGCCTGGTTTCATGGGATTAGCTGCCTCCCTCTATTATCCACAACAAGCCATCGTGTTTGCCCAGGTCAGTGGGGAGAGATTATATGACTGGGGTTTACGAGGATATATAGTCATAGAAGATTTGTGGAAGGAGAACTTTCAAAAGCCAGGAAATGTGAAGAATTCACCTGGAACTAAGTAG
Amino sequence
MFKVIQRSVGPASLSLLTFKVYAAPKKDSPPKNSVKVDELSLYSVPEGQSKYVEEARSQLEESISQLRHYCEPYTTWCQETYSQTKPKMQSLVQWGLDSYDYLQNAPPGFFPRLGVIGFAGLIGLLLARGSKIKKLVYPPGFMGLAASLYYPQQAIVFAQVSGERLYDWGLRGYIVIEDLWKENFQKPGNVKNSPGTK*