ENST00000379226.9 APOO

Information
Transcript ID
ENST00000379226.9
Genome
hg38
Position
chrX:23,833,353-23,907,938
Strand
-
CDS length
597
Amino acid length
199
Gene symbol
APOO
Gene type
protein-coding
Gene description
apolipoprotein O
Gene Entrez Gene ID
79135
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
9 23,833,353 23,833,612
8 23,840,313 23,840,377
7 23,856,302 23,856,382
6 23,858,642 23,858,733
5 23,868,593 23,868,688
4 23,874,403 23,874,457
3 23,878,915 23,879,034
2 23,880,845 23,880,952
1 23,907,694 23,907,938
CDS
Exon number Type Start Stop
8 CDS 23,840,342 23,840,377
7 CDS 23,856,302 23,856,382
6 CDS 23,858,642 23,858,733
5 CDS 23,868,593 23,868,688
4 CDS 23,874,403 23,874,457
3 CDS 23,878,915 23,879,034
2 CDS 23,880,845 23,880,952
1 CDS 23,907,694 23,907,702
Other genome
Genome Chromosome Start End Links
hg19 chrX 23,851,470 23,926,055 Link
CDS sequence
ATGTTCAAGGTAATTCAGAGGTCCGTGGGGCCAGCCAGCCTGAGCTTGCTCACCTTCAAAGTCTATGCAGCACCAAAAAAGGACTCACCTCCCAAAAATTCCGTGAAGGTTGATGAGCTTTCACTCTACTCAGTTCCTGAGGGTCAATCGAAGTATGTGGAGGAGGCAAGGAGCCAGCTTGAAGAAAGCATCTCACAGCTCCGACACTATTGCGAGCCATACACAACCTGGTGTCAGGAAACGTACTCCCAAACTAAGCCCAAGATGCAAAGTTTGGTTCAATGGGGGTTAGACAGCTATGACTATCTCCAAAATGCACCTCCTGGATTTTTTCCGAGACTTGGTGTTATTGGTTTTGCTGGCCTTATTGGACTCCTTTTGGCTAGAGGTTCAAAAATAAAGAAGCTAGTGTATCCGCCTGGTTTCATGGGATTAGCTGCCTCCCTCTATTATCCACAACAAGCCATCGTGTTTGCCCAGGTCAGTGGGGAGAGATTATATGACTGGGGTTTACGAGGATATATAGTCATAGAAGATTTGTGGAAGGAGAACTTTCAAAAGCCAGGAAATGTGAAGAATTCACCTGGAACTAAGTAG
Amino sequence
MFKVIQRSVGPASLSLLTFKVYAAPKKDSPPKNSVKVDELSLYSVPEGQSKYVEEARSQLEESISQLRHYCEPYTTWCQETYSQTKPKMQSLVQWGLDSYDYLQNAPPGFFPRLGVIGFAGLIGLLLARGSKIKKLVYPPGFMGLAASLYYPQQAIVFAQVSGERLYDWGLRGYIVIEDLWKENFQKPGNVKNSPGTK*