ENST00000216038.6 RTCB

Information
Transcript ID
ENST00000216038.6
Genome
hg19
Position
chr22:32,783,569-32,808,234
Strand
-
CDS length
1,518
Amino acid length
506
Gene symbol
RTCB
Gene type
protein-coding
Gene description
RNA 2',3'-cyclic phosphate and 5'-OH ligase
Gene Entrez Gene ID
51493
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
12 32,783,569 32,784,086
11 32,788,227 32,788,346
10 32,789,879 32,789,989
9 32,791,013 32,791,201
8 32,792,061 32,792,236
7 32,793,928 32,794,087
6 32,795,590 32,795,746
5 32,797,734 32,797,890
4 32,802,649 32,802,748
3 32,804,162 32,804,229
2 32,804,742 32,804,820
1 32,808,051 32,808,234
CDS
Exon number Type Start Stop
12 CDS 32,783,979 32,784,086
11 CDS 32,788,227 32,788,346
10 CDS 32,789,879 32,789,989
9 CDS 32,791,013 32,791,201
8 CDS 32,792,061 32,792,236
7 CDS 32,793,928 32,794,087
6 CDS 32,795,590 32,795,746
5 CDS 32,797,734 32,797,890
4 CDS 32,802,649 32,802,748
3 CDS 32,804,162 32,804,229
2 CDS 32,804,742 32,804,820
1 CDS 32,808,051 32,808,143
Other genome
Genome Chromosome Start End Links
hg38 chr22 32,387,582 32,412,247 Link
CDS sequence
ATGAGTCGCAGCTATAATGATGAGCTGCAGTTCTTGGAGAAGATCAATAAAAACTGCTGGAGGATCAAGAAGGGCTTCGTGCCCAACATGCAGGTTGAAGGTGTTTTCTATGTGAATGATGCTCTGGAGAAATTGATGTTTGAGGAATTAAGGAATGCCTGTCGAGGTGGTGGTGTTGGTGGCTTCCTGCCAGCCATGAAACAGATTGGCAATGTGGCAGCCCTGCCTGGAATTGTTCATCGATCTATTGGGCTTCCTGATGTCCATTCAGGATATGGGTTTGCTATTGGGAACATGGCAGCCTTTGATATGAATGACCCTGAAGCAGTAGTATCCCCAGGTGGTGTCGGGTTTGACATCAACTGTGGTGTCCGCTTGCTAAGAACCAATTTAGATGAAAGTGATGTCCAGCCTGTGAAGGAGCAACTTGCCCAAGCTATGTTTGACCACATTCCTGTTGGGGTGGGGTCAAAAGGTGTCATCCCAATGAATGCCAAAGACTTGGAGGAGGCCTTGGAGATGGGGGTGGACTGGTCCTTAAGAGAAGGGTATGCCTGGGCTGAAGACAAGGAGCACTGCGAGGAGTACGGAAGGATGCTGCAGGCTGACCCCAATAAAGTTTCTGCAAGGGCGAAGAAAAGAGGCCTTCCTCAGTTGGGGACCCTGGGAGCAGGCAACCATTATGCAGAAATCCAGGTTGTGGATGAGATTTTCAATGAGTATGCTGCTAAAAAAATGGGCATCGACCATAAGGGACAGGTGTGTGTGATGATCCACAGTGGAAGCAGAGGCTTGGGCCACCAAGTAGCCACAGATGCGCTGGTAGCTATGGAGAAGGCCATGAAGAGAGACAAGATTATAGTCAATGATCGGCAGTTGGCTTGTGCTCGAATCGCTTCCCCAGAGGGTCAAGACTATCTGAAGGGAATGGCAGCTGCTGGGAACTATGCCTGGGTCAACCGCTCTTCCATGACCTTCTTAACCCGTCAGGCTTTCGCCAAGGTCTTCAACACAACCCCTGATGACTTGGACCTACATGTGATCTATGATGTTTCTCACAACATTGCCAAAGTGGAGCAGCATGTGGTGGACGGAAAGGAACGGACACTGTTAGTACACAGGAAGGGATCCACCCGCGCTTTCCCTCCTCACCATCCCCTCATTGCTGTTGATTACCAACTCACTGGACAGCCAGTGCTCATTGGTGGCACCATGGGAACCTGTAGTTATGTTCTTACTGGCACTGAACAGGGCATGACTGAGACCTTTGGAACAACCTGTCATGGAGCGGGCCGTGCATTGTCCCGAGCAAAATCTCGACGTAATTTAGATTTCCAGGATGTCTTAGACAAATTGGCAGATATGGGAATTGCGATCCGTGTTGCCTCACCCAAACTGGTTATGGAAGAGGCTCCTGAGTCCTATAAGAATGTGACAGATGTGGTAAATACCTGCCATGATGCTGGAATCAGCAAGAAAGCCATTAAACTGAGACCAATTGCTGTGATCAAAGGATAG
Amino sequence
MSRSYNDELQFLEKINKNCWRIKKGFVPNMQVEGVFYVNDALEKLMFEELRNACRGGGVGGFLPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGFDINCGVRLLRTNLDESDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLEEALEMGVDWSLREGYAWAEDKEHCEEYGRMLQADPNKVSARAKKRGLPQLGTLGAGNHYAEIQVVDEIFNEYAAKKMGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKIIVNDRQLACARIASPEGQDYLKGMAAAGNYAWVNRSSMTFLTRQAFAKVFNTTPDDLDLHVIYDVSHNIAKVEQHVVDGKERTLLVHRKGSTRAFPPHHPLIAVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMTETFGTTCHGAGRALSRAKSRRNLDFQDVLDKLADMGIAIRVASPKLVMEEAPESYKNVTDVVNTCHDAGISKKAIKLRPIAVIKG*