ENST00000216038.6 RTCB

Information
Transcript ID
ENST00000216038.6
Genome
hg38
Position
chr22:32,387,582-32,412,247
Strand
-
CDS length
1,518
Amino acid length
506
Gene symbol
RTCB
Gene type
protein-coding
Gene description
RNA 2',3'-cyclic phosphate and 5'-OH ligase
Gene Entrez Gene ID
51493
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
12 32,387,582 32,388,099
11 32,392,240 32,392,359
10 32,393,892 32,394,002
9 32,395,026 32,395,214
8 32,396,074 32,396,249
7 32,397,941 32,398,100
6 32,399,603 32,399,759
5 32,401,747 32,401,903
4 32,406,662 32,406,761
3 32,408,175 32,408,242
2 32,408,755 32,408,833
1 32,412,064 32,412,247
CDS
Exon number Type Start Stop
12 CDS 32,387,992 32,388,099
11 CDS 32,392,240 32,392,359
10 CDS 32,393,892 32,394,002
9 CDS 32,395,026 32,395,214
8 CDS 32,396,074 32,396,249
7 CDS 32,397,941 32,398,100
6 CDS 32,399,603 32,399,759
5 CDS 32,401,747 32,401,903
4 CDS 32,406,662 32,406,761
3 CDS 32,408,175 32,408,242
2 CDS 32,408,755 32,408,833
1 CDS 32,412,064 32,412,156
Other genome
Genome Chromosome Start End Links
hg19 chr22 32,783,569 32,808,234 Link
CDS sequence
ATGAGTCGCAGCTATAATGATGAGCTGCAGTTCTTGGAGAAGATCAATAAAAACTGCTGGAGGATCAAGAAGGGCTTCGTGCCCAACATGCAGGTTGAAGGTGTTTTCTATGTGAATGATGCTCTGGAGAAATTGATGTTTGAGGAATTAAGGAATGCCTGTCGAGGTGGTGGTGTTGGTGGCTTCCTGCCAGCCATGAAACAGATTGGCAATGTGGCAGCCCTGCCTGGAATTGTTCATCGATCTATTGGGCTTCCTGATGTCCATTCAGGATATGGGTTTGCTATTGGGAACATGGCAGCCTTTGATATGAATGACCCTGAAGCAGTAGTATCCCCAGGTGGTGTCGGGTTTGACATCAACTGTGGTGTCCGCTTGCTAAGAACCAATTTAGATGAAAGTGATGTCCAGCCTGTGAAGGAGCAACTTGCCCAAGCTATGTTTGACCACATTCCTGTTGGGGTGGGGTCAAAAGGTGTCATCCCAATGAATGCCAAAGACTTGGAGGAGGCCTTGGAGATGGGGGTGGACTGGTCCTTAAGAGAAGGGTATGCCTGGGCTGAAGACAAGGAGCACTGCGAGGAGTACGGAAGGATGCTGCAGGCTGACCCCAATAAAGTTTCTGCAAGGGCGAAGAAAAGAGGCCTTCCTCAGTTGGGGACCCTGGGAGCAGGCAACCATTATGCAGAAATCCAGGTTGTGGATGAGATTTTCAATGAGTATGCTGCTAAAAAAATGGGCATCGACCATAAGGGACAGGTGTGTGTGATGATCCACAGTGGAAGCAGAGGCTTGGGCCACCAAGTAGCCACAGATGCGCTGGTAGCTATGGAGAAGGCCATGAAGAGAGACAAGATTATAGTCAATGATCGGCAGTTGGCTTGTGCTCGAATCGCTTCCCCAGAGGGTCAAGACTATCTGAAGGGAATGGCAGCTGCTGGGAACTATGCCTGGGTCAACCGCTCTTCCATGACCTTCTTAACCCGTCAGGCTTTCGCCAAGGTCTTCAACACAACCCCTGATGACTTGGACCTACATGTGATCTATGATGTTTCTCACAACATTGCCAAAGTGGAGCAGCATGTGGTGGACGGAAAGGAACGGACACTGTTAGTACACAGGAAGGGATCCACCCGCGCTTTCCCTCCTCACCATCCCCTCATTGCTGTTGATTACCAACTCACTGGACAGCCAGTGCTCATTGGTGGCACCATGGGAACCTGTAGTTATGTTCTTACTGGCACTGAACAGGGCATGACTGAGACCTTTGGAACAACCTGTCATGGAGCGGGCCGTGCATTGTCCCGAGCAAAATCTCGACGTAATTTAGATTTCCAGGATGTCTTAGACAAATTGGCAGATATGGGAATTGCGATCCGTGTTGCCTCACCCAAACTGGTTATGGAAGAGGCTCCTGAGTCCTATAAGAATGTGACAGATGTGGTAAATACCTGCCATGATGCTGGAATCAGCAAGAAAGCCATTAAACTGAGACCAATTGCTGTGATCAAAGGATAG
Amino sequence
MSRSYNDELQFLEKINKNCWRIKKGFVPNMQVEGVFYVNDALEKLMFEELRNACRGGGVGGFLPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGFDINCGVRLLRTNLDESDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLEEALEMGVDWSLREGYAWAEDKEHCEEYGRMLQADPNKVSARAKKRGLPQLGTLGAGNHYAEIQVVDEIFNEYAAKKMGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKIIVNDRQLACARIASPEGQDYLKGMAAAGNYAWVNRSSMTFLTRQAFAKVFNTTPDDLDLHVIYDVSHNIAKVEQHVVDGKERTLLVHRKGSTRAFPPHHPLIAVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMTETFGTTCHGAGRALSRAKSRRNLDFQDVLDKLADMGIAIRVASPKLVMEEAPESYKNVTDVVNTCHDAGISKKAIKLRPIAVIKG*