ENST00000372409.8 PCIF1

Information
Transcript ID
ENST00000372409.8
Genome
hg19
Position
chr20:44,563,322-44,576,659
Strand
+
CDS length
2,115
Amino acid length
705
Gene symbol
PCIF1
Gene type
protein-coding
Gene description
phosphorylated CTD interacting factor 1
Gene Entrez Gene ID
63935
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 44,563,322 44,563,443
2 44,566,057 44,566,224
3 44,567,620 44,567,762
4 44,567,854 44,567,978
5 44,569,114 44,569,251
6 44,569,448 44,569,578
7 44,569,692 44,569,846
8 44,571,736 44,571,883
9 44,571,979 44,572,062
10 44,572,305 44,572,404
11 44,573,507 44,573,669
12 44,574,350 44,574,522
13 44,574,668 44,574,754
14 44,574,839 44,575,023
15 44,575,712 44,575,805
16 44,575,902 44,576,077
17 44,576,163 44,576,659
CDS
Exon number Type Start Stop
3 CDS 44,567,639 44,567,762
4 CDS 44,567,854 44,567,978
5 CDS 44,569,114 44,569,251
6 CDS 44,569,448 44,569,578
7 CDS 44,569,692 44,569,846
8 CDS 44,571,736 44,571,883
9 CDS 44,571,979 44,572,062
10 CDS 44,572,305 44,572,404
11 CDS 44,573,507 44,573,669
12 CDS 44,574,350 44,574,522
13 CDS 44,574,668 44,574,754
14 CDS 44,574,839 44,575,023
15 CDS 44,575,712 44,575,805
16 CDS 44,575,902 44,576,077
17 CDS 44,576,163 44,576,394
Other genome
Genome Chromosome Start End Links
hg38 chr20 45,934,683 45,948,020 Link
CDS sequence
ATGGCCAATGAGAATCACGGCAGCCCCCGGGAGGAAGCGTCCCTGCTGAGTCACTCCCCAGGTACCTCCAATCAGAGCCAGCCCTGTTCTCCAAAGCCAATCCGCCTGGTTCAGGACCTCCCAGAGGAGCTGGTGCATGCAGGCTGGGAGAAGTGCTGGAGCCGGAGGGAGAATCGTCCCTACTACTTCAACCGATTCACCAACCAGTCCCTGTGGGAGATGCCCGTGCTGGGGCAGCACGATGTGATTTCGGACCCTTTGGGGCTGAATGCGACCCCACTGCCCCAAGACTCAAGCTTGGTGGAAACTCCCCCGGCTGAGAACAAGCCCAGAAAGCGGCAGCTCTCGGAAGAGCAGCCAAGCGGCAATGGTGTGAAGAAGCCCAAGATTGAAATCCCAGTGACACCCACAGGCCAGTCGGTGCCCAGCTCCCCCAGTATCCCAGGAACCCCAACGCTGAAGATGTGGGGTACGTCCCCTGAAGATAAACAGCAGGCAGCTCTCCTACGACCCACTGAGGTCTACTGGGACCTGGACATCCAGACCAATGCTGTCATCAAGCACCGGGGGCCTTCAGAGGTGCTGCCCCCGCATCCCGAAGTGGAACTGCTCCGCTCTCAGCTCATCCTGAAGCTTCGGCAGCACTATCGGGAGCTGTGCCAGCAGCGAGAGGGCATTGAGCCTCCACGGGAGTCTTTCAACCGCTGGATGCTGGAGCGCAAGGTGGTAGACAAAGGATCTGACCCCCTGTTGCCCAGCAACTGTGAACCAGTCGTGTCACCTTCCATGTTTCGTGAAATCATGAACGACATTCCTATCAGGTTATCCCGAATCAAGTTCCGGGAGGAAGCCAAGCGCCTGCTCTTTAAATATGCGGAGGCCGCCAGGCGGCTCATCGAGTCCAGGAGTGCATCCCCTGACAGTAGGAAGGTGGTCAAATGGAATGTGGAAGACACCTTTAGCTGGCTTCGGAAGGACCACTCAGCCTCCAAGGAGGACTACATGGATCGCCTGGAGCATCTGCGGAGGCAGTGTGGCCCCCACGTCTCGGCCGCAGCCAAGGACTCCGTGGAAGGCATCTGCAGTAAGATCTACCACATCTCCCTGGAGTACGTCAAACGGATCCGAGAGAAGCACCTTGCCATCCTCAAGGAAAACAACATCTCAGAGGAGGTGGAGGCCCCTGAGGTGGAGCCCCGCCTAGTGTACTGCTACCCAGTCCGGCTGGCTGTGTCTGCACCGCCCATGCCCAGCGTGGAGATGCACATGGAGAACAACGTGGTCTGCATCCGGTATAAGGGAGAGATGGTCAAGGTCAGCCGCAACTACTTCAGCAAGCTGTGGCTCCTTTACCGCTACAGCTGCATTGATGACTCTGCCTTTGAGAGGTTCCTGCCCCGGGTCTGGTGTCTTCTCCGACGGTACCAGATGATGTTCGGCGTGGGCCTCTACGAGGGGACTGGCCTGCAGGGATCGCTGCCTGTGCATGTCTTTGAGGCCCTCCACCGACTCTTTGGCGTCAGCTTCGAGTGCTTCGCCTCACCCCTCAACTGCTACTTCCGCCAGTACTGTTCTGCCTTCCCCGACACAGACGGCTACTTTGGCTCCCGCGGGCCCTGCCTAGACTTTGCTCCACTGAGTGGTTCATTTGAGGCCAACCCTCCCTTCTGCGAGGAGCTCATGGATGCCATGGTCTCTCACTTTGAGAGACTGCTTGAGAGCTCACCGGAGCCCCTGTCCTTCATCGTGTTCATCCCTGAGTGGCGGGAACCCCCAACACCAGCGCTCACCCGCATGGAGCAGAGCCGCTTCAAACGCCACCAGTTGATCCTGCCTGCCTTTGAGCATGAGTACCGCAGTGGCTCCCAGCACATCTGCAAGAAGGAGGAAATGCACTACAAGGCCGTCCACAACACGGCTGTGCTCTTCCTACAGAACGACCCTGGCTTTGCCAAGTGGGCGCCGACGCCTGAACGGCTGCAGGAGCTGAGTGCTGCCTACCGGCAGTCAGGCCGCAGCCACAGCTCTGGTTCTTCCTCATCGTCCTCCTCGGAGGCCAAGGACCGGGACTCGGGCCGTGAGCAGGGTCCTAGCCGCGAGCCTCACCCCACTTAA
Amino sequence
MANENHGSPREEASLLSHSPGTSNQSQPCSPKPIRLVQDLPEELVHAGWEKCWSRRENRPYYFNRFTNQSLWEMPVLGQHDVISDPLGLNATPLPQDSSLVETPPAENKPRKRQLSEEQPSGNGVKKPKIEIPVTPTGQSVPSSPSIPGTPTLKMWGTSPEDKQQAALLRPTEVYWDLDIQTNAVIKHRGPSEVLPPHPEVELLRSQLILKLRQHYRELCQQREGIEPPRESFNRWMLERKVVDKGSDPLLPSNCEPVVSPSMFREIMNDIPIRLSRIKFREEAKRLLFKYAEAARRLIESRSASPDSRKVVKWNVEDTFSWLRKDHSASKEDYMDRLEHLRRQCGPHVSAAAKDSVEGICSKIYHISLEYVKRIREKHLAILKENNISEEVEAPEVEPRLVYCYPVRLAVSAPPMPSVEMHMENNVVCIRYKGEMVKVSRNYFSKLWLLYRYSCIDDSAFERFLPRVWCLLRRYQMMFGVGLYEGTGLQGSLPVHVFEALHRLFGVSFECFASPLNCYFRQYCSAFPDTDGYFGSRGPCLDFAPLSGSFEANPPFCEELMDAMVSHFERLLESSPEPLSFIVFIPEWREPPTPALTRMEQSRFKRHQLILPAFEHEYRSGSQHICKKEEMHYKAVHNTAVLFLQNDPGFAKWAPTPERLQELSAAYRQSGRSHSSGSSSSSSSEAKDRDSGREQGPSREPHPT*