ENST00000414310.5 SYS1

Information
Transcript ID
ENST00000414310.5
Genome
hg19
Position
chr20:43,990,591-43,995,865
Strand
+
CDS length
408
Amino acid length
136
Gene symbol
SYS1
Gene type
protein-coding
Gene description
SYS1 golgi trafficking protein
Gene Entrez Gene ID
90196
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 43,990,591 43,990,669
2 43,991,809 43,991,955
3 43,992,184 43,992,333
4 43,994,259 43,994,326
5 43,995,515 43,995,865
CDS
Exon number Type Start Stop
3 CDS 43,992,235 43,992,333
4 CDS 43,994,259 43,994,326
5 CDS 43,995,515 43,995,755
Other genome
Genome Chromosome Start End Links
hg38 chr20 45,361,951 45,367,225 Link
CDS sequence
ATGCAGACCGTGTATTACGGCTCGCTGGGCCTGTGGCTGGCGCTGGTGGACGGGCTAGTGCGAAGCAGCCCCTCGCTGGACCAGATGTTCGACGCCGAGATCCTGGGCTTTTCCACCCCTCCAGGCCGGCTCTCCATGATGTCCTTCATCCTCAACGCCCTCACCTGTGCCCTGGGCTTGCTGTACTTCATCCGGCGAGGAAAGCAGTGTCTGGATTTCACTGTCACTGTCCATTTCTTTCACCTCCTGGGCTGCTGGTTCTACAGCTCCCGTTTCCCCTCGGCGCTGACCTGGTGGCTGGTCCAAGCCGTGTGCATTGCACTCATGGCTGTCATCGGGGAGTACCTGTGCATGCGGACGGAGCTCAAGGAGATACCCCTCAACTCAGCCCCTAAATCCAATGTCTAG
Amino sequence
MQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGRLSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWLVQAVCIALMAVIGEYLCMRTELKEIPLNSAPKSNV*