ENST00000424985.3 GARIN5B

Information
Transcript ID
ENST00000424985.3
Genome
hg19
Position
chr19:55,866,276-55,874,628
Strand
-
CDS length
2,769
Amino acid length
923
Gene symbol
GARIN5B
Gene type
protein-coding
Gene description
golgi associated RAB2 interactor family member 5B
Gene Entrez Gene ID
284418
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
11 55,866,276 55,866,463
10 55,866,628 55,866,713
9 55,869,513 55,871,347
8 55,872,061 55,872,137
7 55,872,221 55,872,273
6 55,872,368 55,872,471
5 55,872,542 55,872,606
4 55,872,778 55,872,802
3 55,873,613 55,873,871
2 55,873,946 55,874,100
1 55,874,285 55,874,628
CDS
Exon number Type Start Stop
10 CDS 55,866,668 55,866,713
9 CDS 55,869,513 55,871,347
8 CDS 55,872,061 55,872,137
7 CDS 55,872,221 55,872,273
6 CDS 55,872,368 55,872,471
5 CDS 55,872,542 55,872,606
4 CDS 55,872,778 55,872,802
3 CDS 55,873,613 55,873,871
2 CDS 55,873,946 55,874,100
1 CDS 55,874,285 55,874,434
Other genome
Genome Chromosome Start End Links
hg38 chr19 55,354,908 55,363,260 Link
CDS sequence
ATGATCTGGCTTCGAAACAGGAGGTGCCTTGAGCCGCTCCAGGGCACCCCGAAGTGGGTCCCTGTTCTGGGGGAGCTGCAAAAGACCCTCCAGAAGGGCGAGTACCTGCCCCTCCGTCCGCTGCCCATGTTCGAGAGTAACTTTGTTCAGGTGACCCATCAAGGGGGCCCAGTGTTCGTGAATCACAGAACCAACCGGCTGGCCATGGGCGTGGCCGCCTCCCTGCCAGGCCTGGTGTTGCCTGACATCTTGCTGATCGGCCAGCCCGCCGAGGACAGGGACTGCTCCGGCCTCGTGCTGACCAGGATGATCCCCCTGGACCTCGTCCACCTCTGCGTCCATGACCTCTCTGCCTGGCGCCTGAAGCTGCGCCTGGTCTCGGGCCGCCAGTACTACCTGGCCCTGGACGCCCCTGACAACGAGGTGGGCTTCCTGTTCCACTGCTGGGTCCGCCTCATCAACCTGCTTCAGGAGCCGGCTCCCACCTGGACCCCCAGGACCACGCGCACGGCCCCCCTGGATATGCCGCTGGCCGAAGCGCCTGCCTCCACCTGGCACCTGCAGGACCAGCCCATCAGCAGACATGCAGTCAGGGTTGCTGAGCGCAACTTTCCGCATAAGACGGTGGCTGCTCAGAGACAGAGGAAGGCCAAGGCGCTCAAGCGCAGTTTCAAGTCTCAGGCCGTGGGCGACTCTGTGCCCCTCATCTGGTCGCAGCTGGAGCATGCTGACGTCAGGAAGAAACCTGCAGAAAAGAAGTCCCACTCAGACCCCCGCCCCGACAGAACTCACACCCAAATCCGCTTGCCTGAGAAGACCAGCATCACCACCTGGACCATCTTCAGCATCATTTCCAGCACCGCCAACCAGACACAGTCCTCTCCAAAGGCCTGCACATCTGCATCTGATGAAGCCACAGGCCAGGGACATGTGGTTGAGAGCCCTTCACACTGTGTCTCAGCTGACAGCCCTGATGGCTTCTTTCTGGGCTCCTGCAGCTCCCTGGACCCGTGCCTGTGGCATCAGGACACGGAAGACCTCATGGACTCTGGGGGCAGCACTTTGTCGTCTGCTGCCTCCGGTCTGGCTCCCTATCCCCCGGCTGCCTGCCTCTCCACACCCTACTCTTCCATCCCCAGGGGCAGGGAAAAGGCCGGGCCTATGGGCTCCCACCAGGGGCCGGGGCCACCACCCTGCCAGAAGGCCCCATCTGGCCTTGTCACATCTTGTAAGGCACCGTTCCTTGTTGACCAGTCCCAGAAGCTCCCAGCTGTACCTGCTTCATCGTGGAAACCCCCACCTGGATTGGCTCCTCCCCAGAAGGCCCCAGCTGCGTCAGCTCCTCCCCGGAAGGCCCCAGCTGTACCTGCTCCATCCCAGAAGGCCCCAGCCGTACCTGCTCCATCCCAGAAGGCCCCAGCCATACCTGCTCCATCCCGGAAGGCCTCAGCTGCGTCAGCTTCTCCCCGAAAGGCCTCAGCCGTACCTGCCCCACCCCAGAAGACCCCACCCCCATCTCAGAAGGCCCCATCTGTACCTACCATTCCCCAGAAGGCTGTGTCCCCCACTGCTCCAAAGAAGAAATCTCTACTCCTCCCTGCCCCATCCCAGAAGGCTCTGCCAACCTCACCTACCGAATACCAGATGGCGCTGAGCCCGCCTGCCTCACGGGGGAAGCTCCCTGGCGATTTTGACGTGTTGCCAACAGGAATTCCTGGAAGAGCCGTGCTGGAGAGAAGCCAGTCTGGAGGGAAACCGGAGCCGGTGGTGACGGTGCGCACCCAGGAGACAGACGTGGTGGAGATGACGACTCAGGCCAAGTCCCCGGAGTCGCCCTTCACCGTGACCAAGAAGGAGTCCAAGGACATCCTGATTAGCCAAACCAAGGAGGTGACCCTGGAGGCCTTCAGGGGCCAGGGGAAGTTGGAGGACTGGGCCCACTGGGCGAAGCTTGAAGAGAGGTCCCCGGACCTGCCTGGCGTGAGATCCAAGGAGTTGGAGCAGCGGAAGAGATGGGTCAAGGCCAAGGAACTGGCCGTCGAGGGCCCCTCCCAGGAGCACAGCAGGCCCTTCTCTGTGGAAGCGCTCACCCTCACCAAGCTCATGATCACGGCCAACTCCAAAGAGCAGCCCTCGAAATCCGCTTTGGTCTCACTTCCCTCCTGGCTCTTGGCGACTCCGCAGGCGTCGGCCACGTCAATGATGGCTTCAGTGCCCTCCCGCCCCGGCCAGCTGTCCTTACTGGAGGGGAAGCCAGTGGTGGTCAGAGAGCAGCCAGAGTCGCACACCTGGGTGAAGGAGGGCAAGCGGCCATGGGGCGAGATGAAGGAGCAGCCATGGGGCGAGATGAAGGAGCCACCCTGGGACCCCAAGGGGCCACCCAAGGTGCCCTTTCGCTCCAAGCCCACCTCTGCCAGTCTGAAGAGGGAAGGAATCTCCCAGGCGCCTATCCCCCTGACCGCCTCACCGTGGGAGGACTTACGGCCATCGCCCCTCTCGGAGACCCTCATCTCAAAGATGGAGGCCACAGCCAGGGCGTCCCAGCAGCCCAAGAGGGTGTCGCAGGAGCCCATGAGGATGCCAGCCCAGCACCCCCTGGCCACTGTGGGGTCGTCTTCAGAAATTCTTTTGCCCATGCTCTTAGAACTTGAAACTGTGAGGAACACGGCCACCAAGGCAGAGGAGATACAGGAGGAATCGGGCGTCTTGAACCTTCTGCCCAGCCTGCAGCACTCCCAGCACTCCGAGTGGCCGGATGCGGGGGCTTAA
Amino sequence
MIWLRNRRCLEPLQGTPKWVPVLGELQKTLQKGEYLPLRPLPMFESNFVQVTHQGGPVFVNHRTNRLAMGVAASLPGLVLPDILLIGQPAEDRDCSGLVLTRMIPLDLVHLCVHDLSAWRLKLRLVSGRQYYLALDAPDNEVGFLFHCWVRLINLLQEPAPTWTPRTTRTAPLDMPLAEAPASTWHLQDQPISRHAVRVAERNFPHKTVAAQRQRKAKALKRSFKSQAVGDSVPLIWSQLEHADVRKKPAEKKSHSDPRPDRTHTQIRLPEKTSITTWTIFSIISSTANQTQSSPKACTSASDEATGQGHVVESPSHCVSADSPDGFFLGSCSSLDPCLWHQDTEDLMDSGGSTLSSAASGLAPYPPAACLSTPYSSIPRGREKAGPMGSHQGPGPPPCQKAPSGLVTSCKAPFLVDQSQKLPAVPASSWKPPPGLAPPQKAPAASAPPRKAPAVPAPSQKAPAVPAPSQKAPAIPAPSRKASAASASPRKASAVPAPPQKTPPPSQKAPSVPTIPQKAVSPTAPKKKSLLLPAPSQKALPTSPTEYQMALSPPASRGKLPGDFDVLPTGIPGRAVLERSQSGGKPEPVVTVRTQETDVVEMTTQAKSPESPFTVTKKESKDILISQTKEVTLEAFRGQGKLEDWAHWAKLEERSPDLPGVRSKELEQRKRWVKAKELAVEGPSQEHSRPFSVEALTLTKLMITANSKEQPSKSALVSLPSWLLATPQASATSMMASVPSRPGQLSLLEGKPVVVREQPESHTWVKEGKRPWGEMKEQPWGEMKEPPWDPKGPPKVPFRSKPTSASLKREGISQAPIPLTASPWEDLRPSPLSETLISKMEATARASQQPKRVSQEPMRMPAQHPLATVGSSSEILLPMLLELETVRNTATKAEEIQEESGVLNLLPSLQHSQHSEWPDAGA*