ENST00000424985.3 GARIN5B

Information
Transcript ID
ENST00000424985.3
Genome
hg38
Position
chr19:55,354,908-55,363,260
Strand
-
CDS length
2,769
Amino acid length
923
Gene symbol
GARIN5B
Gene type
protein-coding
Gene description
golgi associated RAB2 interactor family member 5B
Gene Entrez Gene ID
284418
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
11 55,354,908 55,355,095
10 55,355,260 55,355,345
9 55,358,145 55,359,979
8 55,360,693 55,360,769
7 55,360,853 55,360,905
6 55,361,000 55,361,103
5 55,361,174 55,361,238
4 55,361,410 55,361,434
3 55,362,245 55,362,503
2 55,362,578 55,362,732
1 55,362,917 55,363,260
CDS
Exon number Type Start Stop
10 CDS 55,355,300 55,355,345
9 CDS 55,358,145 55,359,979
8 CDS 55,360,693 55,360,769
7 CDS 55,360,853 55,360,905
6 CDS 55,361,000 55,361,103
5 CDS 55,361,174 55,361,238
4 CDS 55,361,410 55,361,434
3 CDS 55,362,245 55,362,503
2 CDS 55,362,578 55,362,732
1 CDS 55,362,917 55,363,066
Other genome
Genome Chromosome Start End Links
hg19 chr19 55,866,276 55,874,628 Link
CDS sequence
ATGATCTGGCTTCGAAACAGGAGGTGCCTTGAGCCGCTCCAGGGCACCCCGAAGTGGGTCCCTGTTCTGGGGGAGCTGCAAAAGACCCTCCAGAAGGGCGAGTACCTGCCCCTCCGTCCGCTGCCCATGTTCGAGAGTAACTTTGTTCAGGTGACCCATCAAGGGGGCCCAGTGTTCGTGAATCACAGAACCAACCGGCTGGCCATGGGCGTGGCCGCCTCCCTGCCAGGCCTGGTGTTGCCTGACATCTTGCTGATCGGCCAGCCCGCCGAGGACAGGGACTGCTCCGGCCTCGTGCTGACCAGGATGATCCCCCTGGACCTCGTCCACCTCTGCGTCCATGACCTCTCTGCCTGGCGCCTGAAGCTGCGCCTGGTCTCGGGCCGCCAGTACTACCTGGCCCTGGACGCCCCTGACAACGAGGTGGGCTTCCTGTTCCACTGCTGGGTCCGCCTCATCAACCTGCTTCAGGAGCCGGCTCCCACCTGGACCCCCAGGACCACGCGCACGGCCCCCCTGGATATGCCGCTGGCCGAAGCGCCTGCCTCCACCTGGCACCTGCAGGACCAGCCCATCAGCAGACATGCAGTCAGGGTTGCTGAGCGCAACTTTCCGCATAAGACGGTGGCTGCTCAGAGACAGAGGAAGGCCAAGGCGCTCAAGCGCAGTTTCAAGTCTCAGGCCGTGGGCGACTCTGTGCCCCTCATCTGGTCGCAGCTGGAGCATGCTGACGTCAGGAAGAAACCTGCAGAAAAGAAGTCCCACTCAGACCCCCGCCCCGACAGAACTCACACCCAAATCCGCTTGCCTGAGAAGACCAGCATCACCACCTGGACCATCTTCAGCATCATTTCCAGCACCGCCAACCAGACACAGTCCTCTCCAAAGGCCTGCACATCTGCATCTGATGAAGCCACAGGCCAGGGACATGTGGTTGAGAGCCCTTCACACTGTGTCTCAGCTGACAGCCCTGATGGCTTCTTTCTGGGCTCCTGCAGCTCCCTGGACCCGTGCCTGTGGCATCAGGACACGGAAGACCTCATGGACTCTGGGGGCAGCACTTTGTCGTCTGCTGCCTCCGGTCTGGCTCCCTATCCCCCGGCTGCCTGCCTCTCCACACCCTACTCTTCCATCCCCAGGGGCAGGGAAAAGGCCGGGCCTATGGGCTCCCACCAGGGGCCGGGGCCACCACCCTGCCAGAAGGCCCCATCTGGCCTTGTCACATCTTGTAAGGCACCGTTCCTTGTTGACCAGTCCCAGAAGCTCCCAGCTGTACCTGCTTCATCGTGGAAACCCCCACCTGGATTGGCTCCTCCCCAGAAGGCCCCAGCTGCGTCAGCTCCTCCCCGGAAGGCCCCAGCTGTACCTGCTCCATCCCAGAAGGCCCCAGCCGTACCTGCTCCATCCCAGAAGGCCCCAGCCATACCTGCTCCATCCCGGAAGGCCTCAGCTGCGTCAGCTTCTCCCCGAAAGGCCTCAGCCGTACCTGCCCCACCCCAGAAGACCCCACCCCCATCTCAGAAGGCCCCATCTGTACCTACCATTCCCCAGAAGGCTGTGTCCCCCACTGCTCCAAAGAAGAAATCTCTACTCCTCCCTGCCCCATCCCAGAAGGCTCTGCCAACCTCACCTACCGAATACCAGATGGCGCTGAGCCCGCCTGCCTCACGGGGGAAGCTCCCTGGCGATTTTGACGTGTTGCCAACAGGAATTCCTGGAAGAGCCGTGCTGGAGAGAAGCCAGTCTGGAGGGAAACCGGAGCCGGTGGTGACGGTGCGCACCCAGGAGACAGACGTGGTGGAGATGACGACTCAGGCCAAGTCCCCGGAGTCGCCCTTCACCGTGACCAAGAAGGAGTCCAAGGACATCCTGATTAGCCAAACCAAGGAGGTGACCCTGGAGGCCTTCAGGGGCCAGGGGAAGTTGGAGGACTGGGCCCACTGGGCGAAGCTTGAAGAGAGGTCCCCGGACCTGCCTGGCGTGAGATCCAAGGAGTTGGAGCAGCGGAAGAGATGGGTCAAGGCCAAGGAACTGGCCGTCGAGGGCCCCTCCCAGGAGCACAGCAGGCCCTTCTCTGTGGAAGCGCTCACCCTCACCAAGCTCATGATCACGGCCAACTCCAAAGAGCAGCCCTCGAAATCCGCTTTGGTCTCACTTCCCTCCTGGCTCTTGGCGACTCCGCAGGCGTCGGCCACGTCAATGATGGCTTCAGTGCCCTCCCGCCCCGGCCAGCTGTCCTTACTGGAGGGGAAGCCAGTGGTGGTCAGAGAGCAGCCAGAGTCGCACACCTGGGTGAAGGAGGGCAAGCGGCCATGGGGCGAGATGAAGGAGCAGCCATGGGGCGAGATGAAGGAGCCACCCTGGGACCCCAAGGGGCCACCCAAGGTGCCCTTTCGCTCCAAGCCCACCTCTGCCAGTCTGAAGAGGGAAGGAATCTCCCAGGCGCCTATCCCCCTGACCGCCTCACCGTGGGAGGACTTACGGCCATCGCCCCTCTCGGAGACCCTCATCTCAAAGATGGAGGCCACAGCCAGGGCGTCCCAGCAGCCCAAGAGGGTGTCGCAGGAGCCCATGAGGATGCCAGCCCAGCACCCCCTGGCCACTGTGGGGTCGTCTTCAGAAATTCTTTTGCCCATGCTCTTAGAACTTGAAACTGTGAGGAACACGGCCACCAAGGCAGAGGAGATACAGGAGGAATCGGGCGTCTTGAACCTTCTGCCCAGCCTGCAGCACTCCCAGCACTCCGAGTGGCCGGATGCGGGGGCTTAA
Amino sequence
MIWLRNRRCLEPLQGTPKWVPVLGELQKTLQKGEYLPLRPLPMFESNFVQVTHQGGPVFVNHRTNRLAMGVAASLPGLVLPDILLIGQPAEDRDCSGLVLTRMIPLDLVHLCVHDLSAWRLKLRLVSGRQYYLALDAPDNEVGFLFHCWVRLINLLQEPAPTWTPRTTRTAPLDMPLAEAPASTWHLQDQPISRHAVRVAERNFPHKTVAAQRQRKAKALKRSFKSQAVGDSVPLIWSQLEHADVRKKPAEKKSHSDPRPDRTHTQIRLPEKTSITTWTIFSIISSTANQTQSSPKACTSASDEATGQGHVVESPSHCVSADSPDGFFLGSCSSLDPCLWHQDTEDLMDSGGSTLSSAASGLAPYPPAACLSTPYSSIPRGREKAGPMGSHQGPGPPPCQKAPSGLVTSCKAPFLVDQSQKLPAVPASSWKPPPGLAPPQKAPAASAPPRKAPAVPAPSQKAPAVPAPSQKAPAIPAPSRKASAASASPRKASAVPAPPQKTPPPSQKAPSVPTIPQKAVSPTAPKKKSLLLPAPSQKALPTSPTEYQMALSPPASRGKLPGDFDVLPTGIPGRAVLERSQSGGKPEPVVTVRTQETDVVEMTTQAKSPESPFTVTKKESKDILISQTKEVTLEAFRGQGKLEDWAHWAKLEERSPDLPGVRSKELEQRKRWVKAKELAVEGPSQEHSRPFSVEALTLTKLMITANSKEQPSKSALVSLPSWLLATPQASATSMMASVPSRPGQLSLLEGKPVVVREQPESHTWVKEGKRPWGEMKEQPWGEMKEPPWDPKGPPKVPFRSKPTSASLKREGISQAPIPLTASPWEDLRPSPLSETLISKMEATARASQQPKRVSQEPMRMPAQHPLATVGSSSEILLPMLLELETVRNTATKAEEIQEESGVLNLLPSLQHSQHSEWPDAGA*