ENST00000534484.1 LMO1

Information
Transcript ID
ENST00000534484.1
Genome
hg38
Position
chr11:8,224,479-8,263,858
Strand
-
CDS length
438
Amino acid length
146
Gene symbol
LMO1
Gene type
protein-coding
Gene description
LIM domain only 1
Gene Entrez Gene ID
4004
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 8,224,479 8,224,721
3 8,226,975 8,227,100
2 8,230,291 8,230,504
1 8,263,672 8,263,858
CDS
Exon number Type Start Stop
4 CDS 8,224,616 8,224,721
3 CDS 8,226,975 8,227,100
2 CDS 8,230,291 8,230,496
Other genome
Genome Chromosome Start End Links
hg19 chr11 8,246,026 8,285,405 Link
CDS sequence
ATGCTCTCCGTCCAGCCCAAAGGGAAGCAGAAGGGCTGTGCGGGCTGTAACCGCAAGATCAAGGACCGCTATCTGCTGAAGGCATTGGACAAGTACTGGCACGAAGACTGCCTCAAGTGTGCCTGCTGTGACTGCCGCCTGGGCGAGGTGGGCTCCACCCTCTACACCAAGGCCAACCTCATCCTGTGCCGACGCGACTACCTGAGGCTCTTTGGCACCACAGGGAACTGTGCTGCTTGCAGCAAGCTGATCCCAGCCTTCGAGATGGTGATGCGGGCCCGGGACAACGTGTATCACCTCGACTGCTTCGCCTGCCAGCTCTGCAACCAGAGATTTTGTGTGGGAGACAAATTCTTCCTGAAGAACAACATGATCTTGTGTCAGATGGACTATGAGGAAGGGCAGCTCAATGGCACCTTTGAATCCCAAGTTCAGTAA
Amino sequence
MLSVQPKGKQKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNCAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFFLKNNMILCQMDYEEGQLNGTFESQVQ*