LMO1 LIM domain only 1

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Information
Clinical Significance
Ranking
Frequency
Disease area statistics
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Information

Symbol: LMO1
Type: protein-coding
Description: LIM domain only 1
Entrez Gene ID: 4004
Genome: hg19
Position: chr11:8,245,856-8,285,425
Genome: hg38
Position: chr11:8,224,309-8,263,878
MIM: 186921 OMIM
HGNC: HGNC:6641 HGNC
Ensembl: ENSG00000166407 Ensembl
Links: NCBI Gene Cards OncoKB

Clinical Significance

	MGeND	ClinVar
Benign	0	2
not provided	10	0
Uncertain significance	0	10

Ranking

	ClinVar
	0
	0
	0
	10
	2

Frequency

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

EXAC_EAS

EXAC_EAS

HGVD

HGVD

TOMMO

TOMMO

Gene

Position

Disease area statistics

Locus Zoom

Variants

Search Word

Target data	:	MGeND data only
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Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	MGeND				Genome	ClinVar			CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction
Variant name	Gene	AA change	CDS	Japanese frequency	TogoVar	Entry	Origin	Type	Annotation	Genome	Entry	Origin	Annotation	CIViC evidence	DisGeNET entry	COSMIC occurrence	Prediction

Search Word

Target data	:	MGeND data only
Category	:
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Name	MGeND				Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Size	Chromosome	Start	Stop	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Search Word

Target data	:	MGeND data only
Category	:
Search word	:
Filtering	:

Name	MGeND				Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry
Name	Entry	Origin	Type	Annotation	Type	Genome	Gene symbol	Chromosome	Genomic start	Genomic stop	Strand	Ref	Alt	ClinVar	Origin	Entry	CIViC evidence	DisGeNET entry

Type	ID
SYNONYM	RBTN1
SYNONYM	RHOM1
SYNONYM	TTG1
MIM	186921 OMIM
HGNC	HGNC:6641 HGNC
Ensembl	ENSG00000166407 Ensembl
AllianceGenome	HGNC:6641

Descrption	Source	Links

ID	Genome	Chromosome	Start	End	Length
ENST00000534484.1	hg38	chr11	8,224,479	8,263,858	39,380
ENST00000335790.8	hg38	chr11	8,224,309	8,263,878	39,570
ENST00000428101.6	hg38	chr11	8,224,314	8,268,716	44,403
ENST00000335790.8	hg19	chr11	8,245,856	8,285,425	39,570
ENST00000428101.6	hg19	chr11	8,245,861	8,290,263	44,403
ENST00000534484.1	hg19	chr11	8,246,026	8,285,405	39,380

Key	Value
strand	-
UniProt	OG
start	8,245,850
Gene Symbol	LMO1
Entrez GeneId	4,004
Chr Band	11p15
end	8,290,181
chr	chr11
Name	LIM domain only 1 (rhombotin 1) (RBTN1)

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