ENST00000643617.1 CCDC9

Information
Transcript ID
ENST00000643617.1
Genome
hg19
Position
chr19:47,759,780-47,776,958
Strand
+
CDS length
1,764
Amino acid length
588
Gene symbol
CCDC9
Gene type
protein-coding
Gene description
coiled-coil domain containing 9
Gene Entrez Gene ID
26093
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 47,759,780 47,759,866
2 47,761,587 47,761,660
3 47,761,816 47,761,920
4 47,763,578 47,763,679
5 47,763,845 47,764,096
6 47,767,860 47,767,943
7 47,768,030 47,768,203
8 47,769,868 47,770,049
9 47,773,664 47,773,710
10 47,773,810 47,773,945
11 47,774,339 47,774,444
12 47,774,531 47,774,906
13 47,775,326 47,775,418
14 47,776,614 47,776,958
CDS
Exon number Type Start Stop
2 CDS 47,761,658 47,761,660
3 CDS 47,761,816 47,761,920
4 CDS 47,763,578 47,763,679
5 CDS 47,763,845 47,764,096
6 CDS 47,767,860 47,767,943
7 CDS 47,768,030 47,768,203
8 CDS 47,769,868 47,770,049
9 CDS 47,773,664 47,773,710
10 CDS 47,773,810 47,773,945
11 CDS 47,774,339 47,774,444
12 CDS 47,774,531 47,774,906
13 CDS 47,775,326 47,775,418
14 CDS 47,776,614 47,776,717
Other genome
Genome Chromosome Start End Links
hg38 chr19 47,256,523 47,273,701 Link
CDS sequence
ATGGCAGCCACACTCGATTTGAAATCAAAGGAGGAGAAGGATGCTGAGTTGGACAAGAGGATCGAGGCTCTTCGGCGGAAGAATGAGGCCCTCATCCGGCGCTACCAGGAGATTGAGGAAGACCGTAAGAAAGCTGAACTTGAGGGAGTCGCAGTCACAGCTCCCCGAAAGGGCCGCTCAGTGGAGAAGGAGAACGTGGCAGTGGAGTCGGAGAAGAACCTGGGTCCTTCCCGGAGGTCTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCAAGGGGGGCCGGACTCCTCCACAGCAGGGAGGCCGGGCCGGCATGGGCCGAGCATCGCGCAGCTGGGAGGGCAGCCCCGGGGAGCAGCCTCGAGGAGGAGGAGCTGGGGGCCGTGGCCGGAGGGGCCGGGGCCGAGGTTCACCTCACCTCTCTGGAGCTGGAGACACCTCAATCTCTGACCGTAAATCCAAGGAGTGGGAGGAGCGGCGCAGGCAGAACATTGAGAAGATGAATGAGGAGATGGAGAAGATCGCCGAGTATGAGCGCAACCAGCGGGAAGGGGTTCTTGAACCCAACCCAGTGCGGAACTTCCTGGACGACCCCCGGCGACGCAGCGGGCCCCTGGAGGAGTCTGAGCGGGACCGCCGGGAGGAGAGCCGCCGGCACGGCCGCAACTGGGGGGGCCCCGACTTCGAGCGGGTGCGCTGTGGCCTTGAGCACGAGCGGCAGGGCCGCCGAGCTGGCCTGGGCAGTGCTGGAGACATGACGTTGTCCATGACGGGCCGGGAGCGGTCGGAGTACCTGCGCTGGAAGCAGGAGAGGGAGAAGATCGACCAGGAGCGGCTGCAGAGGCACCGCAAGCCCACTGGCCAGTGGAGGCGCGAGTGGGATGCCGAGAAGACCGATGGGATGTTCAAGGATGGCCCAGTCCCTGCCCATGAACCATCCCACCGCTATGATGACCAGGCCTGGGCCCGGCCCCCGAAGCCCCCTACTTTTGGGGAGTTCCTGTCCCAGCACAAAGCTGAGGCCAGCAGCCGCAGAAGGAGAAAGAGCAGTCGGCCCCAGGCCAAGGCAGCGCCCAGGGCCTACAGTGACCATGATGACCGCTGGGAGACAAAAGAAGGGGCAGCATCCCCAGCCCCTGAGACTCCACAGCCTACTTCCCCCGAGACTTCCCCCAAGGAGACACCCATGCAGCCACCCGAGATCCCAGCTCCTGCCCACCGGCCTCCTGAAGACGAGGGGGAAGAGAATGAGGGGGAAGAGGATGAAGAATGGGAGGACATAAGTGAGGATGAGGAAGAGGAGGAGATCGAGGTGGAAGAAGGTGATGAGGAGGAACCAGCCCAAGACCACCAAGCCCCAGAGGCTGCCCCCACCGGGATCCCCTGCAGTGAGCAGGCCCACGGAGTCCCCTTCAGTCCGGAGGAGCCCCTGCTGGAGCCCCAGGCCCCTGGCACGCCTTCCAGCCCTTTCTCACCACCCAGCGGCCACCAGCCTGTGTCCGATTGGGGTGAAGAGGTGGAGCTGAATTCTCCCCGGACCACTCACCTGGCTGGCGCCCTCTCCCCGGGAGGTGGCCAGTCAGCCCCTGCCTTCCCGGAGAGTGGGCCCAGCCTCCGAGGAACCCAGGAAGCTGAAGAGGAAGGGTCTGAGGCAACTCCAGAGGCAGGCCCCGAAGGCCAGGAGACGGCGGAGATCACCGACTTCCAGAGGGTGCGTTTCTGCAAGGTGGTGGCGGCCCCTCCGCTGCCGGGGGCCGCTCGCTGA
Amino sequence
MAATLDLKSKEEKDAELDKRIEALRRKNEALIRRYQEIEEDRKKAELEGVAVTAPRKGRSVEKENVAVESEKNLGPSRRSPGTPRPPGASKGGRTPPQQGGRAGMGRASRSWEGSPGEQPRGGGAGGRGRRGRGRGSPHLSGAGDTSISDRKSKEWEERRRQNIEKMNEEMEKIAEYERNQREGVLEPNPVRNFLDDPRRRSGPLEESERDRREESRRHGRNWGGPDFERVRCGLEHERQGRRAGLGSAGDMTLSMTGRERSEYLRWKQEREKIDQERLQRHRKPTGQWRREWDAEKTDGMFKDGPVPAHEPSHRYDDQAWARPPKPPTFGEFLSQHKAEASSRRRRKSSRPQAKAAPRAYSDHDDRWETKEGAASPAPETPQPTSPETSPKETPMQPPEIPAPAHRPPEDEGEENEGEEDEEWEDISEDEEEEEIEVEEGDEEEPAQDHQAPEAAPTGIPCSEQAHGVPFSPEEPLLEPQAPGTPSSPFSPPSGHQPVSDWGEEVELNSPRTTHLAGALSPGGGQSAPAFPESGPSLRGTQEAEEEGSEATPEAGPEGQETAEITDFQRVRFCKVVAAPPLPGAAR*