ENST00000643617.1 CCDC9

Information
Transcript ID
ENST00000643617.1
Genome
hg38
Position
chr19:47,256,523-47,273,701
Strand
+
CDS length
1,764
Amino acid length
588
Gene symbol
CCDC9
Gene type
protein-coding
Gene description
coiled-coil domain containing 9
Gene Entrez Gene ID
26093
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 47,256,523 47,256,609
2 47,258,330 47,258,403
3 47,258,559 47,258,663
4 47,260,321 47,260,422
5 47,260,588 47,260,839
6 47,264,603 47,264,686
7 47,264,773 47,264,946
8 47,266,611 47,266,792
9 47,270,407 47,270,453
10 47,270,553 47,270,688
11 47,271,082 47,271,187
12 47,271,274 47,271,649
13 47,272,069 47,272,161
14 47,273,357 47,273,701
CDS
Exon number Type Start Stop
2 CDS 47,258,401 47,258,403
3 CDS 47,258,559 47,258,663
4 CDS 47,260,321 47,260,422
5 CDS 47,260,588 47,260,839
6 CDS 47,264,603 47,264,686
7 CDS 47,264,773 47,264,946
8 CDS 47,266,611 47,266,792
9 CDS 47,270,407 47,270,453
10 CDS 47,270,553 47,270,688
11 CDS 47,271,082 47,271,187
12 CDS 47,271,274 47,271,649
13 CDS 47,272,069 47,272,161
14 CDS 47,273,357 47,273,460
Other genome
Genome Chromosome Start End Links
hg19 chr19 47,759,780 47,776,958 Link
CDS sequence
ATGGCAGCCACACTCGATTTGAAATCAAAGGAGGAGAAGGATGCTGAGTTGGACAAGAGGATCGAGGCTCTTCGGCGGAAGAATGAGGCCCTCATCCGGCGCTACCAGGAGATTGAGGAAGACCGTAAGAAAGCTGAACTTGAGGGAGTCGCAGTCACAGCTCCCCGAAAGGGCCGCTCAGTGGAGAAGGAGAACGTGGCAGTGGAGTCGGAGAAGAACCTGGGTCCTTCCCGGAGGTCTCCTGGGACCCCTCGGCCCCCAGGGGCCAGCAAGGGGGGCCGGACTCCTCCACAGCAGGGAGGCCGGGCCGGCATGGGCCGAGCATCGCGCAGCTGGGAGGGCAGCCCCGGGGAGCAGCCTCGAGGAGGAGGAGCTGGGGGCCGTGGCCGGAGGGGCCGGGGCCGAGGTTCACCTCACCTCTCTGGAGCTGGAGACACCTCAATCTCTGACCGTAAATCCAAGGAGTGGGAGGAGCGGCGCAGGCAGAACATTGAGAAGATGAATGAGGAGATGGAGAAGATCGCCGAGTATGAGCGCAACCAGCGGGAAGGGGTTCTTGAACCCAACCCAGTGCGGAACTTCCTGGACGACCCCCGGCGACGCAGCGGGCCCCTGGAGGAGTCTGAGCGGGACCGCCGGGAGGAGAGCCGCCGGCACGGCCGCAACTGGGGGGGCCCCGACTTCGAGCGGGTGCGCTGTGGCCTTGAGCACGAGCGGCAGGGCCGCCGAGCTGGCCTGGGCAGTGCTGGAGACATGACGTTGTCCATGACGGGCCGGGAGCGGTCGGAGTACCTGCGCTGGAAGCAGGAGAGGGAGAAGATCGACCAGGAGCGGCTGCAGAGGCACCGCAAGCCCACTGGCCAGTGGAGGCGCGAGTGGGATGCCGAGAAGACCGATGGGATGTTCAAGGATGGCCCAGTCCCTGCCCATGAACCATCCCACCGCTATGATGACCAGGCCTGGGCCCGGCCCCCGAAGCCCCCTACTTTTGGGGAGTTCCTGTCCCAGCACAAAGCTGAGGCCAGCAGCCGCAGAAGGAGAAAGAGCAGTCGGCCCCAGGCCAAGGCAGCGCCCAGGGCCTACAGTGACCATGATGACCGCTGGGAGACAAAAGAAGGGGCAGCATCCCCAGCCCCTGAGACTCCACAGCCTACTTCCCCCGAGACTTCCCCCAAGGAGACACCCATGCAGCCACCCGAGATCCCAGCTCCTGCCCACCGGCCTCCTGAAGACGAGGGGGAAGAGAATGAGGGGGAAGAGGATGAAGAATGGGAGGACATAAGTGAGGATGAGGAAGAGGAGGAGATCGAGGTGGAAGAAGGTGATGAGGAGGAACCAGCCCAAGACCACCAAGCCCCAGAGGCTGCCCCCACCGGGATCCCCTGCAGTGAGCAGGCCCACGGAGTCCCCTTCAGTCCGGAGGAGCCCCTGCTGGAGCCCCAGGCCCCTGGCACGCCTTCCAGCCCTTTCTCACCACCCAGCGGCCACCAGCCTGTGTCCGATTGGGGTGAAGAGGTGGAGCTGAATTCTCCCCGGACCACTCACCTGGCTGGCGCCCTCTCCCCGGGAGGTGGCCAGTCAGCCCCTGCCTTCCCGGAGAGTGGGCCCAGCCTCCGAGGAACCCAGGAAGCTGAAGAGGAAGGGTCTGAGGCAACTCCAGAGGCAGGCCCCGAAGGCCAGGAGACGGCGGAGATCACCGACTTCCAGAGGGTGCGTTTCTGCAAGGTGGTGGCGGCCCCTCCGCTGCCGGGGGCCGCTCGCTGA
Amino sequence
MAATLDLKSKEEKDAELDKRIEALRRKNEALIRRYQEIEEDRKKAELEGVAVTAPRKGRSVEKENVAVESEKNLGPSRRSPGTPRPPGASKGGRTPPQQGGRAGMGRASRSWEGSPGEQPRGGGAGGRGRRGRGRGSPHLSGAGDTSISDRKSKEWEERRRQNIEKMNEEMEKIAEYERNQREGVLEPNPVRNFLDDPRRRSGPLEESERDRREESRRHGRNWGGPDFERVRCGLEHERQGRRAGLGSAGDMTLSMTGRERSEYLRWKQEREKIDQERLQRHRKPTGQWRREWDAEKTDGMFKDGPVPAHEPSHRYDDQAWARPPKPPTFGEFLSQHKAEASSRRRRKSSRPQAKAAPRAYSDHDDRWETKEGAASPAPETPQPTSPETSPKETPMQPPEIPAPAHRPPEDEGEENEGEEDEEWEDISEDEEEEEIEVEEGDEEEPAQDHQAPEAAPTGIPCSEQAHGVPFSPEEPLLEPQAPGTPSSPFSPPSGHQPVSDWGEEVELNSPRTTHLAGALSPGGGQSAPAFPESGPSLRGTQEAEEEGSEATPEAGPEGQETAEITDFQRVRFCKVVAAPPLPGAAR*