ENST00000397545.9 CCDC40

Information
Transcript ID
ENST00000397545.9
Genome
hg19
Position
chr17:78,010,441-78,074,412
Strand
+
CDS length
3,429
Amino acid length
1,143
Gene symbol
CCDC40
Gene type
protein-coding
Gene description
coiled-coil domain 40 molecular ruler complex subunit
Gene Entrez Gene ID
55036
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 78,010,441 78,010,490
2 78,011,922 78,011,985
3 78,013,611 78,014,069
4 78,021,078 78,021,201
5 78,022,382 78,022,560
6 78,023,705 78,023,788
7 78,023,863 78,024,082
8 78,032,293 78,032,450
9 78,032,657 78,032,779
10 78,039,284 78,039,405
11 78,055,345 78,055,588
12 78,055,675 78,055,857
13 78,058,542 78,058,787
14 78,059,802 78,060,015
15 78,061,406 78,061,575
16 78,061,810 78,061,901
17 78,063,563 78,063,683
18 78,069,062 78,069,250
19 78,071,044 78,071,202
20 78,073,326 78,074,412
CDS
Exon number Type Start Stop
1 CDS 78,010,462 78,010,490
2 CDS 78,011,922 78,011,985
3 CDS 78,013,611 78,014,069
4 CDS 78,021,078 78,021,201
5 CDS 78,022,382 78,022,560
6 CDS 78,023,705 78,023,788
7 CDS 78,023,863 78,024,082
8 CDS 78,032,293 78,032,450
9 CDS 78,032,657 78,032,779
10 CDS 78,039,284 78,039,405
11 CDS 78,055,345 78,055,588
12 CDS 78,055,675 78,055,857
13 CDS 78,058,542 78,058,787
14 CDS 78,059,802 78,060,015
15 CDS 78,061,406 78,061,575
16 CDS 78,061,810 78,061,901
17 CDS 78,063,563 78,063,683
18 CDS 78,069,062 78,069,250
19 CDS 78,071,044 78,071,202
20 CDS 78,073,326 78,073,574
Other genome
Genome Chromosome Start End Links
hg38 chr17 80,036,642 80,100,613 Link
CDS sequence
ATGGCGGAACCGGGCGGCGCGGCGGGCCGGTCCCATCCGGAAGATGGATCGGCTTCTGAGGGAGAGAAGGAAGGGAATAATGAAAGCCACATGGTGTCACCACCAGAGAAGGATGATGGCCAGAAAGGTGAAGAAGCTGTCGGTAGCACAGAGCATCCTGAGGAAGTCACAACCCAAGCGGAAGCTGCAATTGAAGAGGGGGAGGTGGAGACAGAAGGGGAAGCAGCAGTGGAAGGGGAAGAGGAGGCTGTGTCCTATGGAGATGCTGAAAGCGAAGAGGAATATTACTATACAGAAACTTCATCCCCGGAAGGGCAAATCAGTGCTGCAGATACGACTTACCCGTATTTCAGTCCTCCTCAGGAACTGCCTGGAGAGGAGGCATACGATAGTGTTAGCGGGGAGGCTGGTCTCCAAGGCTTCCAGCAAGAGGCCACCGGTCCACCAGAATCCAGAGAAAGGAGGGTCACCTCCCCAGAGCCATCCCACGGAGTCTTAGGCCCGTCGGAGCAAATGGGCCAGGTCACCTCTGGGCCAGCAGTGGGCAGATTGACAGGATCCACAGAGGAGCCCCAGGGGCAGGTGCTCCCAATGGGCGTCCAGCACCGCTTCCGGCTGAGCCACGGGAGCGACATCGAGTCCTCAGACCTGGAGGAGTTCGTCTCGCAGGAGCCAGTGATCCCCCCAGGGGTGCCCGATGCCCACCCCAGGGAAGGAGACCTGCCAGTGTTCCAGGACCAGATCCAGCAGCCCAGCACCGAGGAGGGGGCCATGGCAGAGAGAGTGGAGTCCGAGGGGAGTGACGAGGAAGCAGAAGACGAAGGGTCCCAGCTGGTGGTTTTGGACCCAGACCACCCCCTGATGGTAAGATTCCAGGCTGCCCTGAAGAACTACCTGAACCGACAGATCGAAAAGTTGAAGCTGGACCTCCAAGAGCTGGTTGTGGCTACCAAGCAGAGCCGAGCCCAGCGGCAGGAGCTGGGGGTGAATCTCTATGAGGTGCAGCAGCACCTGGTACACCTGCAGAAGCTGCTGGAGAAGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGCGCAGGCAGAAGGAGGAGGAGCTGCAGGCCGCCCGCGCTCTCTACACCAAGACCTGCGCAGCCGCCAACGAGGAGCGCAAAAAGTTGGCGGCTCTGCAGACTGAGATGGAGAACTTGGCCCTGCATCTCTTCTACATGCAGAACATCGACCAGGACATGCGTGACGACATCCGCGTGATGACACAAGTGGTAAAGAAGGCCGAGACGGAGAGGATCCGGGCAGAAATCGAGAAGAAAAAGCAGGACCTGTATGTGGACCAGCTCACCACTCGAGCCCAGCAACTGGAAGAAGACATTGCCCTGTTTGAGGCTCAGTACTTGGCCCAAGCTGAGGACACCCGGATTTTAAGGAAAGCAGTGAGTGAGGCCTGCACCGAGATCGACGCCATCAGCGTGGAGAAGAGGCGCATCATGCAGCAATGGGCCAGCAGCCTGGTGGGCATGAAGCACCGCGACGAGGCGCACAGGGCGGTGCTGGAGGCGCTCAGAGGATGCCAGCATCAAGCCAAATCCACCGACGGCGAGATTGAGGCCTATAAGAAATCCATCATGAAGGAGGAAGAAAAGAACGAGAAGCTGGCGAGCATCCTGAACCGGACAGAGACGGAAGCCACACTGCTGCAGAAGCTCACCACCCAGTGCCTGACCAAGCAGGTGGCCCTGCAGAGCCAGTTCAATACCTACAGGCTCACCCTGCAGGACACAGAGGATGCCCTCAGCCAGGACCAGCTGGAACAAATGATACTCACGGAGGAGTTGCAGGCCATCCGCCAAGCCATCCAGGGCGAGCTGGAGCTCAGGAGGAAGACGGATGCTGCCATCCGGGAGAAGCTGCAGGAGCACATGACCTCCAACAAGACCACCAAATACTTCAACCAGCTCATCCTGAGGCTGCAGAAGGAGAAGACCAACATGATGACACATCTTTCCAAAATCAACGGTGACATTGCCCAGACCACCCTGGACATCACACACACCAGCAGCAGGCTGGACGCACACCAGAAGACCCTGGTGGAGCTGGACCAGGACGTGAAGAAAGTCAACGAGCTCATCACCAACAGCCAGAGCGAGATCTCCCGGCGCACGATCCTGATCGAGAGGAAGCAAGGGCTCATCAACTTCCTCAACAAGCAGCTGGAGCGGATGGTCTCCGAGCTGGGGGGGGAAGAAGTGGGGCCCCTGGAGCTTGAAATCAAAAGGCTGAGCAAGCTGATCGACGAGCACGATGGCAAGGCGGTCCAGGCCCAGGTGACCTGGCTGCGCCTGCAGCAGGAGATGGTCAAGGTGACACAGGAGCAGGAGGAGCAGCTGGCCTCCCTGGACGCATCCAAGAAGGAGCTCCACATCATGGAGCAGAAGAAACTACGAGTAGAAAGCAAGATTGAGCAGGAGAAGAAGGAGCAGAAGGAGATCGAGCACCACATGAAGGACCTGGACAACGACCTGAAGAAGCTCAACATGTTGATGAATAAAAACCGGTGCAGCTCGGAGGAGCTGGAGCAGAACAACCGGGTGACAGAGAATGAGTTCGTGCGCTCGCTGAAGGCCTCTGAGAGGGAGACCATCAAGATGCAGGACAAGCTGAACCAGCTCAGCGAGGAGAAGGCGACCCTCCTGAATCAACTGGTGGAAGCAGAACACCAGATTATGCTTTGGGAGAAAAAAATCCAACTGGCAAAAGAGATGCGTTCCTCAGTGGATTCCGAGATCGGCCAGACGGAGATCCGGGCCATGAAGGGCGAGATCCACAGGATGAAGGTCAGGCTCGGGCAGCTGCTGAAGCAGCAGGAGAAGATGATCCGTGCCATGGAGTTGGCGGTTGCCCGCAGAGAGACCGTCACCACCCAGGCCGAGGGGCAGCGCAAGATGGACAGGAAGGCGCTCACCCGCACCGACTTCCACCACAAGCAGCTTGAGCTGCGCCGGAAAATCAGGGACGTTCGCAAGGCCACCGATGAGTGCACCAAAACCGTCCTGGAACTGGAAGAAACACAAAGAAATGTGAGCAGCTCCCTCCTAGAGAAGCAGGAAAAGCTGTCGGTGATTCAGGCAGACTTCGACACACTCGAGGCCGACCTCACCCGGCTTGGGGCCCTCAAACGACAGAACCTTTCAGAGATCGTGGCCCTGCAGACACGCCTTAAGCACCTGCAGGCTGTGAAGGAGGGGCGCTACGTGTTCCTGTTCCGCTCCAAGCAGTCCCTAGTGCTGGAGCGCCAGCGCCTGGACAAGCGACTGGCTCTCATCGCCACCATCCTGGACCGCGTGCGGGACGAGTACCCCCAGTTCCAGGAGGCCCTGCACAAGGTCAGCCAGATGATCGCCAACAAGCTCGAGTCACCAGGGCCCTCCTAG
Amino sequence
MAEPGGAAGRSHPEDGSASEGEKEGNNESHMVSPPEKDDGQKGEEAVGSTEHPEEVTTQAEAAIEEGEVETEGEAAVEGEEEAVSYGDAESEEEYYYTETSSPEGQISAADTTYPYFSPPQELPGEEAYDSVSGEAGLQGFQQEATGPPESRERRVTSPEPSHGVLGPSEQMGQVTSGPAVGRLTGSTEEPQGQVLPMGVQHRFRLSHGSDIESSDLEEFVSQEPVIPPGVPDAHPREGDLPVFQDQIQQPSTEEGAMAERVESEGSDEEAEDEGSQLVVLDPDHPLMVRFQAALKNYLNRQIEKLKLDLQELVVATKQSRAQRQELGVNLYEVQQHLVHLQKLLEKSHDRHAMASSERRQKEEELQAARALYTKTCAAANEERKKLAALQTEMENLALHLFYMQNIDQDMRDDIRVMTQVVKKAETERIRAEIEKKKQDLYVDQLTTRAQQLEEDIALFEAQYLAQAEDTRILRKAVSEACTEIDAISVEKRRIMQQWASSLVGMKHRDEAHRAVLEALRGCQHQAKSTDGEIEAYKKSIMKEEEKNEKLASILNRTETEATLLQKLTTQCLTKQVALQSQFNTYRLTLQDTEDALSQDQLEQMILTEELQAIRQAIQGELELRRKTDAAIREKLQEHMTSNKTTKYFNQLILRLQKEKTNMMTHLSKINGDIAQTTLDITHTSSRLDAHQKTLVELDQDVKKVNELITNSQSEISRRTILIERKQGLINFLNKQLERMVSELGGEEVGPLELEIKRLSKLIDEHDGKAVQAQVTWLRLQQEMVKVTQEQEEQLASLDASKKELHIMEQKKLRVESKIEQEKKEQKEIEHHMKDLDNDLKKLNMLMNKNRCSSEELEQNNRVTENEFVRSLKASERETIKMQDKLNQLSEEKATLLNQLVEAEHQIMLWEKKIQLAKEMRSSVDSEIGQTEIRAMKGEIHRMKVRLGQLLKQQEKMIRAMELAVARRETVTTQAEGQRKMDRKALTRTDFHHKQLELRRKIRDVRKATDECTKTVLELEETQRNVSSSLLEKQEKLSVIQADFDTLEADLTRLGALKRQNLSEIVALQTRLKHLQAVKEGRYVFLFRSKQSLVLERQRLDKRLALIATILDRVRDEYPQFQEALHKVSQMIANKLESPGPS*