ENST00000405159.8 VCF1
Information
- Transcript ID
- ENST00000405159.8
- Genome
- hg19
- Position
- chr17:71,203,504-71,228,533
- Strand
- -
- CDS length
- 624
- Amino acid length
- 208
- Gene symbol
- VCF1
- Gene type
- protein-coding
- Gene description
- VCP nuclear cofactor family member 1
- Gene Entrez Gene ID
- 84923
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 4 | 71,203,504 | 71,205,907 |
| 3 | 71,208,817 | 71,208,879 |
| 2 | 71,223,304 | 71,223,403 |
| 1 | 71,228,225 | 71,228,533 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 4 | CDS | 71,205,668 | 71,205,907 |
| 3 | CDS | 71,208,817 | 71,208,879 |
| 2 | CDS | 71,223,304 | 71,223,403 |
| 1 | CDS | 71,228,225 | 71,228,445 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr17 | 73,207,365 | 73,232,394 | Link |
CDS sequence
ATGGGGGGGCGCGGAGCAGACGCCGGAAGTAGTGGTGGTACGGGTCCGACTGAGGGGTACTCGCCACCGGCTGCGTCCACCCGAGCGGCTGCGAGAGCCAAGGCCCGAGGGGGTGGGCGTGGCGGCCGCCGAAACACAACCCCCTCTGTTCCCTCTCTTCGCGGAGCGGCGCCGCGTAGCTTCCATCCGCCAGCTGCCATGAGCGAGCGCCTCCGTCCCAGGAAAAGGAGAAGGAATGGCAACGAAGAAGACAACCATCTTCCCCCCCAGACCAAAAGAAGTAGCAGAAACCCTGTCTTTCAGGATTCCTGGGACACAGAGACAGTACCTGTAATGAGAAACAGTAAAGAAAACAGACTAAGAGGAAACAAAGCGTTCTGCGCGTCTTCAGGCAGTGACAGTGGTGGGAGCAGCAGCAGCAGCAGCAGCAGCATCAATAGCCCGGACAGGGCCAGCGGGCCGGAAGGCAGCTTGAGCCAGACCATGGCCGGATCCAGCCCTAACACGCCTCAGCCCGTGCCCGAGCAGTCCGCGCTGTGCCAAGGCCTCTACTTCCACATCAACCAGACCCTGAGGGAGGCCCACTTCCACAGCCTACAGCACCGAGGGCGGCCTCTGACATGA
Amino sequence
MGGRGADAGSSGGTGPTEGYSPPAASTRAAARAKARGGGRGGRRNTTPSVPSLRGAAPRSFHPPAAMSERLRPRKRRRNGNEEDNHLPPQTKRSSRNPVFQDSWDTETVPVMRNSKENRLRGNKAFCASSGSDSGGSSSSSSSSINSPDRASGPEGSLSQTMAGSSPNTPQPVPEQSALCQGLYFHINQTLREAHFHSLQHRGRPLT*