VCF1 VCP nuclear cofactor family member 1
Information
- Symbol
- VCF1
- Type
- protein-coding
- Description
- VCP nuclear cofactor family member 1
- Entrez Gene ID
- 84923
- Genome
- hg19
- Position
- chr17:71,203,504-71,228,533
- Genome
- hg38
- Position
- chr17:73,207,365-73,232,394
- HGNC
- HGNC:25918 HGNC
- Ensembl
- ENSG00000133193 Ensembl
- Links
- NCBI Gene Cards OncoKB
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 4 |
| Likely benign | 0 | 20 |
| Uncertain significance | 0 | 76 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
10 |
 |
88 |
 |
0 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | FAM104A |
| HGNC | HGNC:25918 HGNC |
| Ensembl | ENSG00000133193 Ensembl |
| AllianceGenome | HGNC:25918 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000403627.7 | hg38 | chr17 | 73,207,353 | 73,232,367 | 25,015 |
| ENST00000405159.8 | hg38 | chr17 | 73,207,365 | 73,232,394 | 25,030 |
| ENST00000581110.1 | hg38 | chr17 | 73,209,566 | 73,232,394 | 22,829 |
| ENST00000583024.1 | hg38 | chr17 | 73,209,605 | 73,232,320 | 22,716 |
| ENST00000403627.7 | hg19 | chr17 | 71,203,492 | 71,228,506 | 25,015 |
| ENST00000405159.8 | hg19 | chr17 | 71,203,504 | 71,228,533 | 25,030 |
| ENST00000581110.1 | hg19 | chr17 | 71,205,705 | 71,228,533 | 22,829 |
| ENST00000583024.1 | hg19 | chr17 | 71,205,744 | 71,228,459 | 22,716 |
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