ENST00000582252.1 CCDC47

Information
Transcript ID
ENST00000582252.1
Genome
hg19
Position
chr17:61,829,130-61,850,930
Strand
-
CDS length
1,443
Amino acid length
481
Gene symbol
CCDC47
Gene type
protein-coding
Gene description
coiled-coil domain containing 47
Gene Entrez Gene ID
57003
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
12 61,829,130 61,829,467
11 61,829,680 61,829,789
10 61,830,101 61,830,159
9 61,831,793 61,831,878
8 61,833,600 61,833,710
7 61,833,829 61,833,930
6 61,838,274 61,838,339
5 61,838,590 61,838,711
4 61,841,376 61,841,550
3 61,842,100 61,842,207
2 61,843,272 61,843,554
1 61,850,772 61,850,930
CDS
Exon number Type Start Stop
12 CDS 61,829,228 61,829,467
11 CDS 61,829,680 61,829,789
10 CDS 61,830,101 61,830,159
9 CDS 61,831,793 61,831,878
8 CDS 61,833,600 61,833,710
7 CDS 61,833,829 61,833,930
6 CDS 61,838,274 61,838,339
5 CDS 61,838,590 61,838,711
4 CDS 61,841,376 61,841,550
3 CDS 61,842,100 61,842,207
2 CDS 61,843,272 61,843,535
Other genome
Genome Chromosome Start End Links
hg38 chr17 63,751,770 63,773,570 Link
CDS sequence
ATGAAAGCCTTCCACACTTTCTGTGTTGTCCTTCTGGTGTTTGGGAGTGTCTCTGAAGCCAAGTTTGATGATTTTGAGGATGAGGAGGACATAGTAGAGTATGATGATAATGACTTCGCTGAATTTGAGGATGTCATGGAAGACTCTGTTACTGAATCTCCTCAACGGGTCATAATCACTGAAGATGATGAAGATGAGACCACTGTGGAGTTGGAAGGGCAGGATGAAAACCAAGAAGGAGATTTTGAAGATGCAGATACCCAGGAGGGAGATACTGAGAGTGAACCATATGATGATGAAGAATTTGAAGGTTATGAAGACAAACCAGATACTTCTTCTAGCAAAAATAAAGACCCAATAACGATTGTTGATGTTCCTGCACACCTCCAGAACAGCTGGGAGAGTTATTATCTAGAAATTTTGATGGTGACTGGTCTGCTTGCTTATATCATGAATTACATCATTGGGAAGAATAAAAACAGTCGCCTTGCACAGGCCTGGTTTAACACTCATAGGGAGCTTTTGGAGAGCAACTTTACTTTAGTGGGGGATGATGGAACTAACAAAGAAGCCACAAGCACAGGAAAGTTGAACCAGGAGAATGAGCACATCTATAACCTGTGGTGTTCTGGTCGAGTGTGCTGTGAGGGCATGCTTATCCAGCTGAGGTTCCTCAAGAGACAAGACTTACTGAATGTCCTGGCCCGGATGATGAGGCCAGTGAGTGATCAAGTGCAAATAAAAGTAACCATGAATGATGAAGACATGGATACCTACGTATTTGCTGTTGGCACACGGAAAGCCTTGGTGCGACTACAGAAAGAGATGCAGGATTTGAGTGAGTTTTGTAGTGATAAACCTAAGTCTGGAGCAAAGTATGGACTGCCGGACTCTTTGGCCATCCTGTCAGAGATGGGAGAAGTCACAGACGGAATGATGGATACAAAGATGGTTCACTTTCTTACACACTATGCTGACAAGATTGAATCTGTTCATTTTTCAGACCAGTTCTCTGGTCCAAAAATTATGCAAGAGGAAGGTCAGCCTTTAAAGCTACCTGACACTAAGAGGACACTGTTGTTTACATTTAATGTGCCTGGCTCAGGTAACACTTACCCAAAGGATATGGAGGCACTGCTACCCCTGATGAACATGGTGATTTATTCTATTGATAAAGCCAAAAAGTTCCGACTCAACAGAGAAGGCAAACAAAAAGCAGATAAGAACCGTGCCCGAGTAGAAGAGAACTTCTTGAAACTGACACATGTGCAAAGACAGGAAGCAGCACAGTCTCGGCGGGAGGAGAAAAAAAGAGCAGAGAAGGAGCGAATCATGAATGAGGAAGATCCTGAGAAACAGCGCAGGCTGGAGGTTAGACAAACTTATCACTGGGGTAAAACTACGATTTGTAAGGATGACTGCTTGTGTTCTGTTGGTTGTTAA
Amino sequence
MKAFHTFCVVLLVFGSVSEAKFDDFEDEEDIVEYDDNDFAEFEDVMEDSVTESPQRVIITEDDEDETTVELEGQDENQEGDFEDADTQEGDTESEPYDDEEFEGYEDKPDTSSSKNKDPITIVDVPAHLQNSWESYYLEILMVTGLLAYIMNYIIGKNKNSRLAQAWFNTHRELLESNFTLVGDDGTNKEATSTGKLNQENEHIYNLWCSGRVCCEGMLIQLRFLKRQDLLNVLARMMRPVSDQVQIKVTMNDEDMDTYVFAVGTRKALVRLQKEMQDLSEFCSDKPKSGAKYGLPDSLAILSEMGEVTDGMMDTKMVHFLTHYADKIESVHFSDQFSGPKIMQEEGQPLKLPDTKRTLLFTFNVPGSGNTYPKDMEALLPLMNMVIYSIDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAEKERIMNEEDPEKQRRLEVRQTYHWGKTTICKDDCLCSVGC*