ENST00000582252.1 CCDC47

Information
Transcript ID
ENST00000582252.1
Genome
hg38
Position
chr17:63,751,770-63,773,570
Strand
-
CDS length
1,443
Amino acid length
481
Gene symbol
CCDC47
Gene type
protein-coding
Gene description
coiled-coil domain containing 47
Gene Entrez Gene ID
57003
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
12 63,751,770 63,752,107
11 63,752,320 63,752,429
10 63,752,741 63,752,799
9 63,754,433 63,754,518
8 63,756,240 63,756,350
7 63,756,469 63,756,570
6 63,760,914 63,760,979
5 63,761,230 63,761,351
4 63,764,016 63,764,190
3 63,764,740 63,764,847
2 63,765,912 63,766,194
1 63,773,412 63,773,570
CDS
Exon number Type Start Stop
12 CDS 63,751,868 63,752,107
11 CDS 63,752,320 63,752,429
10 CDS 63,752,741 63,752,799
9 CDS 63,754,433 63,754,518
8 CDS 63,756,240 63,756,350
7 CDS 63,756,469 63,756,570
6 CDS 63,760,914 63,760,979
5 CDS 63,761,230 63,761,351
4 CDS 63,764,016 63,764,190
3 CDS 63,764,740 63,764,847
2 CDS 63,765,912 63,766,175
Other genome
Genome Chromosome Start End Links
hg19 chr17 61,829,130 61,850,930 Link
CDS sequence
ATGAAAGCCTTCCACACTTTCTGTGTTGTCCTTCTGGTGTTTGGGAGTGTCTCTGAAGCCAAGTTTGATGATTTTGAGGATGAGGAGGACATAGTAGAGTATGATGATAATGACTTCGCTGAATTTGAGGATGTCATGGAAGACTCTGTTACTGAATCTCCTCAACGGGTCATAATCACTGAAGATGATGAAGATGAGACCACTGTGGAGTTGGAAGGGCAGGATGAAAACCAAGAAGGAGATTTTGAAGATGCAGATACCCAGGAGGGAGATACTGAGAGTGAACCATATGATGATGAAGAATTTGAAGGTTATGAAGACAAACCAGATACTTCTTCTAGCAAAAATAAAGACCCAATAACGATTGTTGATGTTCCTGCACACCTCCAGAACAGCTGGGAGAGTTATTATCTAGAAATTTTGATGGTGACTGGTCTGCTTGCTTATATCATGAATTACATCATTGGGAAGAATAAAAACAGTCGCCTTGCACAGGCCTGGTTTAACACTCATAGGGAGCTTTTGGAGAGCAACTTTACTTTAGTGGGGGATGATGGAACTAACAAAGAAGCCACAAGCACAGGAAAGTTGAACCAGGAGAATGAGCACATCTATAACCTGTGGTGTTCTGGTCGAGTGTGCTGTGAGGGCATGCTTATCCAGCTGAGGTTCCTCAAGAGACAAGACTTACTGAATGTCCTGGCCCGGATGATGAGGCCAGTGAGTGATCAAGTGCAAATAAAAGTAACCATGAATGATGAAGACATGGATACCTACGTATTTGCTGTTGGCACACGGAAAGCCTTGGTGCGACTACAGAAAGAGATGCAGGATTTGAGTGAGTTTTGTAGTGATAAACCTAAGTCTGGAGCAAAGTATGGACTGCCGGACTCTTTGGCCATCCTGTCAGAGATGGGAGAAGTCACAGACGGAATGATGGATACAAAGATGGTTCACTTTCTTACACACTATGCTGACAAGATTGAATCTGTTCATTTTTCAGACCAGTTCTCTGGTCCAAAAATTATGCAAGAGGAAGGTCAGCCTTTAAAGCTACCTGACACTAAGAGGACACTGTTGTTTACATTTAATGTGCCTGGCTCAGGTAACACTTACCCAAAGGATATGGAGGCACTGCTACCCCTGATGAACATGGTGATTTATTCTATTGATAAAGCCAAAAAGTTCCGACTCAACAGAGAAGGCAAACAAAAAGCAGATAAGAACCGTGCCCGAGTAGAAGAGAACTTCTTGAAACTGACACATGTGCAAAGACAGGAAGCAGCACAGTCTCGGCGGGAGGAGAAAAAAAGAGCAGAGAAGGAGCGAATCATGAATGAGGAAGATCCTGAGAAACAGCGCAGGCTGGAGGTTAGACAAACTTATCACTGGGGTAAAACTACGATTTGTAAGGATGACTGCTTGTGTTCTGTTGGTTGTTAA
Amino sequence
MKAFHTFCVVLLVFGSVSEAKFDDFEDEEDIVEYDDNDFAEFEDVMEDSVTESPQRVIITEDDEDETTVELEGQDENQEGDFEDADTQEGDTESEPYDDEEFEGYEDKPDTSSSKNKDPITIVDVPAHLQNSWESYYLEILMVTGLLAYIMNYIIGKNKNSRLAQAWFNTHRELLESNFTLVGDDGTNKEATSTGKLNQENEHIYNLWCSGRVCCEGMLIQLRFLKRQDLLNVLARMMRPVSDQVQIKVTMNDEDMDTYVFAVGTRKALVRLQKEMQDLSEFCSDKPKSGAKYGLPDSLAILSEMGEVTDGMMDTKMVHFLTHYADKIESVHFSDQFSGPKIMQEEGQPLKLPDTKRTLLFTFNVPGSGNTYPKDMEALLPLMNMVIYSIDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAEKERIMNEEDPEKQRRLEVRQTYHWGKTTICKDDCLCSVGC*