ENST00000268893.10 TSPOAP1

Information
Transcript ID
ENST00000268893.10
Genome
hg19
Position
chr17:56,378,592-56,406,121
Strand
-
CDS length
5,394
Amino acid length
1,798
Gene symbol
TSPOAP1
Gene type
protein-coding
Gene description
TSPO associated protein 1
Gene Entrez Gene ID
9256
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
31 56,378,592 56,379,808
30 56,381,699 56,381,760
29 56,382,422 56,382,532
28 56,382,748 56,382,819
27 56,382,901 56,383,004
26 56,383,194 56,383,226
25 56,383,703 56,383,774
24 56,384,161 56,384,329
23 56,384,972 56,385,123
22 56,385,203 56,385,302
21 56,385,902 56,386,741
20 56,387,328 56,387,519
19 56,387,873 56,388,112
18 56,388,197 56,388,574
17 56,388,932 56,389,083
16 56,389,253 56,390,083
15 56,393,384 56,393,493
14 56,393,786 56,393,901
13 56,395,641 56,395,813
12 56,396,451 56,396,655
11 56,397,470 56,397,490
10 56,397,892 56,397,942
9 56,399,669 56,399,773
8 56,400,015 56,400,137
7 56,400,311 56,400,400
6 56,400,659 56,400,742
5 56,400,829 56,400,906
4 56,402,172 56,402,363
3 56,403,654 56,403,782
2 56,404,044 56,404,151
1 56,404,949 56,406,121
CDS
Exon number Type Start Stop
30 CDS 56,381,731 56,381,760
29 CDS 56,382,422 56,382,532
28 CDS 56,382,748 56,382,819
27 CDS 56,382,901 56,383,004
26 CDS 56,383,194 56,383,226
25 CDS 56,383,703 56,383,774
24 CDS 56,384,161 56,384,329
23 CDS 56,384,972 56,385,123
22 CDS 56,385,203 56,385,302
21 CDS 56,385,902 56,386,741
20 CDS 56,387,328 56,387,519
19 CDS 56,387,873 56,388,112
18 CDS 56,388,197 56,388,574
17 CDS 56,388,932 56,389,083
16 CDS 56,389,253 56,390,083
15 CDS 56,393,384 56,393,493
14 CDS 56,393,786 56,393,901
13 CDS 56,395,641 56,395,813
12 CDS 56,396,451 56,396,655
11 CDS 56,397,470 56,397,490
10 CDS 56,397,892 56,397,942
9 CDS 56,399,669 56,399,773
8 CDS 56,400,015 56,400,137
7 CDS 56,400,311 56,400,400
6 CDS 56,400,659 56,400,742
5 CDS 56,400,829 56,400,906
4 CDS 56,402,172 56,402,363
3 CDS 56,403,654 56,403,782
2 CDS 56,404,044 56,404,151
1 CDS 56,404,949 56,405,281
Other genome
Genome Chromosome Start End Links
hg38 chr17 58,301,231 58,328,760 Link
CDS sequence
ATGGAGCAACTGACAACCCTCCCACGGCCTGGGGACCCTGGAGCCATGGAGCCATGGGCACTGCCCACCTGGCATAGCTGGACTCCAGGTCGAGGGGGTGAACCTAGCAGTGCAGCCCCAAGCATCGCTGATACTCCTCCGGCAGCTCTGCAGCTTCAAGAACTGAGGTCTGAGGAGAGTTCCAAGCCCAAAGGAGACGGGAGCTCCAGGCCCGTGGGGGGAACTGACCCTGAAGGAGCAGAGGCTTGTCTGCCCAGCCTGGGCCAGCAAGCATCCAGCTCTGGACCCGCCTGCCAGAGGCCAGAGGATGAGGAAGTGGAGGCTTTCCTGAAGGCCAAGCTGAATATGAGCTTTGGGGACAGGCCCAATCTGGAGCTGCTGAGGGCCCTGGGGGAGCTGCGGCAGCGCTGTGCCATCCTTAAGGAGGAAAACCAGATGCTGAGGAAGAGCAGCTTCCCTGAGACAGAAGAGAAGGTGCGGAGGCTGAAGAGGAAGAACGCCGAGCTGGCGGTCATTGCCAAGCGCCTGGAGGAGAGGGCCCGAAAGCTGCAGGAAACGAACCTGAGGGTGGAGGGTCCCCAGTGGCTCCACGTGCGGGACTTCGATCGGCTGCTGCGCGAGTCCCAGCGGGAGGTGCTGCGGCTGCAGAGGCAGATCGCGCTGCGCAACCAGCGGGAGACGCTCCCGCTCCCGCCGTCCTGGCCCCCGGGCCCTGCTCTCCAGGCCAGAGCAGGGGCGCCTGCTCCCGGGGCCCCGGGAGAGGCCACGCCCCAGGAGGATGCGGACAACCTACCCGTGATTCTAGGGGAGCCAGAGAAAGAGCAGAGGGTGCAGCAGCTGGAATCGGAGCTCAGCAAGAAGCGGAAGAAATGCGAGAGCCTGGAGCAGGAAGCCCGGAAAAAGCAGAGGCGATGTGAGGAGCTGGAACTGCAGCTGAGACAAGCGCAGAATGAGAATGCCCGCCTGGTGGAGGAGAACTCCCGGCTCAGTGGGAGAGCCACAGAGAAGGAGCAGGTGGAGTGGGAGAATGCGGAGCTGAGGGGCCAGCTCCTGGGGGTGACACAGGAGAGGGACTCAGCCCTTCGCAAGAGCCAGGGCCTGCAGAGCAAGCTGGAGAGCCTGGAGCAAGTGCTGAAGCACATGCGGGAGGTGGCCCAGCGGCGGCAGCAGCTGGAGGTGGAGCATGAACAGGCTCGGCTCAGCCTACGGGAGAAGCAGGAGGAGGTCCGGAGACTGCAGCAGGCCCAGGCTGAAGCCCAGAGGGAACATGAAGGAGCCGTGCAGCTGCTGGAGTCTACCTTGGATTCCATGCAGGCCCGGGTTCGAGAGCTCGAAGAACAGTGCCGCAGCCAAACCGAGCAGTTCAGCCTCCTGGCACAGGAACTCCAGGCTTTCCGCCTGCACCCGGGCCCCTTGGATCTGCTCACATCTGCCCTGGACTGTGGGAGCCTTGGAGACTGCCCACCACCCCCCTGCTGCTGCTCCATTCCCCAGCCTTGCCGGGGGTCTGGCCCCAAAGACCTTGACCTCCCGCCGGGCTCCCCTGGGCGCTGCACCCCAAAGTCTTCCGAGCCTGCCCCTGCCACTCTCACTGGGGTCCCTCGAAGGACAGCCAAGAAGGCAGAGTCTCTCTCCAACTCCTCCCACTCCGAGTCCATCCACAACAGCCCCAAGTCATGCCCTACACCTGAGGTGGACACAGCCAGTGAGGTAGAGGAGCTGGAGGCAGACAGTGTCTCCCTGCTCCCAGCTGCGCCAGAGGGCAGCCGGGGAGGAGCCAGGATCCAGGTCTTCCTAGCACGTTATAGCTACAACCCCTTTGAGGGTCCCAATGAGAATCCAGAAGCAGAGCTTCCGCTGACAGCTGGCGAGTACATCTACATCTATGGCAACATGGATGAGGATGGCTTTTTTGAAGGAGAGCTCATGGATGGCCGAAGGGGCCTGGTCCCTTCCAATTTTGTAGAGCGTGTGTCGGATGATGACCTCCTGACCTCCCTCCCTCCAGAGCTGGCCGATTTGTCCCACAGCTCAGGCCCTGAACTCAGTTTCCTGAGTGTAGGTGGGGGTGGCAGCAGTAGCGGGGGCCAAAGCAGTGTGGGAAGGAGCCAGCCCAGACCTGAGGAGGAGGATGCAGGGGACGAGCTCAGTCTGAGCCCATCACCGGAGGGCCTGGGCGAGCCTCCTGCCGTGCCTTACCCCCGCCGTCTGGTGGTCCTCAAGCAGCTGGCCCACAGCGTGGTGCTGGCCTGGGAGCCGCCTCCTGAGCAAGTGGAGCTACACGGCTTCCATATCTGTGTGAATGGGGAGCTGCGACAGGCCCTGGGGCCTGGGGCGCCACCCAAGGCCGTGCTGGAGAACCTGGACCTGTGGGCCGGGCCCCTTCACATTTCTGTCCAGGCCCTGACTAGCCGGGGCAGCTCTGACCCACTGCGCTGTTGCTTGGCGGTGGGTGCCCGGGCCGGAGTGGTGCCCAGCCAGCTGCGGGTCCATCGGTTGACAGCCACATCTGCTGAGATCACCTGGGTGCCCGGCAATAGCAACTTGGCCCATGCCATCTACCTCAATGGGGAAGAGTGCCCACCTGCCAGCCCCAGTACCTACTGGGCCACCTTCTGCCACTTACGGCCTGGCACACCCTATCAGGCCCAAGTGGAGGCTCAGCTCCCACCCCAAGGGCCCTGGGAACCAGGCTGGGAGAGGCTGGAGCAGCGGGCTGCCACCCTGCAGTTCACCACACTCCCAGCAGGCCCACCTGATGCCCCTCTGGATGTGCAGATCGAGCCTGGGCCCTCCCCTGGGATCTTGATCATCAGTTGGCTCCCAGTCACCATCGATGCTGCTGGCACATCCAACGGTGTCCGGGTCACAGGCTATGCCATCTACGCTGATGGGCAGAAGATCATGGAGGTGGCCTCACCCACGGCAGGCAGTGTACTGGTGGAGTTGTCCCAGCTGCAGCTGCTGCAGGTGTGTCGTGAGGTGGTCGTGCGCACCATGTCGCCCCACGGGGAGTCGGCGGACTCCATCCCGGCTCCTATCACTCCCGCCCTGGCTCCGGCCAGCCTGCCAGCCCGAGTCTCCTGCCCCTCACCGCACCCAAGCCCAGAGGCCAGAGCGCCCCTTGCTTCAGCCTCCCCAGGGCCTGGAGACCCCAGCTCTCCTCTCCAGCACCCTGCTCCCCTTGGAACTCAAGAGCCTCCAGGAGCACCCCCTGCAAGCCCTTCCAGAGAGATGGCAAAAGGGTCCCACGAGGACCCTCCAGCACCTTGCTCCCAGGAGGAGGCTGGGGCAGCAGTGCTGGGCACCTCAGAGGAGAGGACAGCCAGCACATCTACCCTGGGTGAGAAGGACCCTGGCCCCGCAGCTCCCTCACTGGCCAAGCAGGAGGCCGAGTGGACTGCAGGAGAGGCCTGTCCGGCCTCCAGCTCCACCCAGGGAGCACGGGCCCAGCAGGCGCCAAATACCGAGATGTGCCAAGGAGGAGACCCAGGGTCTGGGCTGAGGCCCAGGGCTGAGAAGGAGGACACAGCAGAGCTTGGGGTTCATCTGGTGAACTCCCTCGTGGACCACGGCCGCAACTCAGACCTGTCAGACATCCAGGAGGAAGAGGAAGAGGAGGAGGAGGAGGAGGAAGAGGAGCTGGGTTCCAGGACTTGCTCCTTCCAGAAGCAGGTTGCTGGCAACAGCATCAGGGAGAATGGGGCCAAGTCCCAGCCCGACCCCTTTTGTGAGACTGACAGCGATGAGGAGATCTTGGAGCAGATCCTGGAGCTGCCCCTCCAGCAGTTCTGTAGCAAGAAGCTCTTTAGCATCCCGGAGGAGGAGGAAGAGGAAGAGGAGGACGAGGAGGAGGAGAAGTCAGGGGCAGGCTGTTCTTCCCGAGACCCTGGCCCGCCTGAACCTGCATTGCTGGGGCTGGGCTGTGACAGTGGTCAGCCCCGAAGACCTGGCCAGTGTCCCTTGTCTCCTGAGTCCTCCAGGGCTGGAGACTGCCTGGAAGACATGCCTGGATTAGTTGGTGGAAGCAGCCGGAGGAGAGGAGGGGGCTCCCCTGAGAAGCCCCCAAGCCGCAGGCGGCCTCCAGATCCCCGAGAACACTGCAGCCGACTTCTCAGCAACAATGGGCCCCAGGCCTCTGGACGACTGGGCCCCACACGGGAGAGGGGTGGCCTCCCCGTAATTGAGGGCCCCAGGACTGGACTAGAGGCTAGCGGGAGAGGCCGGCTGGGCCCTTCCCGGAGGTGCTCCCGTGGCCGGGCGCTGGAGCCTGGCCTGGCCAGCTGCCTTTCCCCCAAGTGCTTGGAAATCAGCATTGAATATGATTCGGAGGATGAGCAGGAGGCGGGCAGCGGGGGCATCAGCATCACCAGCTCCTGCTACCCTGGAGATGGGGAGGCCTGGGGCACAGCAACTGTAGGAAGGCCCAGGGGGCCTCCGAAGGCCAATTCAGGCCCCAAGCCCTACCCACGCCTCCCAGCCTGGGAGAAAGGGGAACCAGAGCGGAGAGGCCGCAGTGCGACGGGCAGAGCCAAGGAGCCACTCTCCCGGGCAACAGAGACCGGAGAGGCCAGAGGGCAGGACGGCTCTGGGCGGAGGGGCCCCCAGAAGAGAGGTGTCCGAGTCCTCAGGCCAAGCACTGCAGAGCTAGTCCCTGCGAGGAGCCCCTCAGAAACACTGGCTTACCAGCACCTACCCGTCAGGATCTTTGTGGCTCTGTTTGACTATGACCCCGTGTCAATGTCGCCCAATCCTGATGCTGGAGAAGAAGAGCTTCCCTTCCGAGAGGGTCAGATCCTGAAGGTGTTTGGGGACAAGGATGCCGATGGCTTCTACCAGGGCGAAGGTGGGGGCCGGACAGGCTACATTCCCTGCAACATGGTGGCTGAGGTGGCTGTGGACAGCCCTGCTGGGAGACAGCAACTGCTCCAGCGGGGTTATTTGTCCCCAGATATTCTCCTTGAGGGCTCAGGGAATGGTCCGTTTGTGTACTCCACAGCCCACACAACTGGGCCTCCTCCCAAGCCCCGCCGCTCCAAGAAAGCTGAGTCGGAAGGCCCTGCCCAGCCCTGTCCAGGCCCCCCTAAGCTGGTCCCCTCTGCTGACCTGAAAGCTCCCCACTCCATGGTGGCTGCATTTGACTACAACCCCCAGGAGAGTTCCCCCAATATGGACGTGGAGGCAGAGCTGCCCTTCCGGGCAGGGGATGTCATTACTGTGTTTGGGGGCATGGACGATGACGGTTTCTACTATGGGGAATTAAATGGACAAAGGGGCCTGGTTCCATCCAACTTCCTGGAGGGCCCTGGGCCTGAGGCAGGCGGCCTGGACAGGGAACCCAGGACACCCCAGGCTGAGAGTCAGAGAACGAGGAGGAGAAGAGTCCAGTGCTAG
Amino sequence
MEQLTTLPRPGDPGAMEPWALPTWHSWTPGRGGEPSSAAPSIADTPPAALQLQELRSEESSKPKGDGSSRPVGGTDPEGAEACLPSLGQQASSSGPACQRPEDEEVEAFLKAKLNMSFGDRPNLELLRALGELRQRCAILKEENQMLRKSSFPETEEKVRRLKRKNAELAVIAKRLEERARKLQETNLRVEGPQWLHVRDFDRLLRESQREVLRLQRQIALRNQRETLPLPPSWPPGPALQARAGAPAPGAPGEATPQEDADNLPVILGEPEKEQRVQQLESELSKKRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEKEQVEWENAELRGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQLEVEHEQARLSLREKQEEVRRLQQAQAEAQREHEGAVQLLESTLDSMQARVRELEEQCRSQTEQFSLLAQELQAFRLHPGPLDLLTSALDCGSLGDCPPPPCCCSIPQPCRGSGPKDLDLPPGSPGRCTPKSSEPAPATLTGVPRRTAKKAESLSNSSHSESIHNSPKSCPTPEVDTASEVEELEADSVSLLPAAPEGSRGGARIQVFLARYSYNPFEGPNENPEAELPLTAGEYIYIYGNMDEDGFFEGELMDGRRGLVPSNFVERVSDDDLLTSLPPELADLSHSSGPELSFLSVGGGGSSSGGQSSVGRSQPRPEEEDAGDELSLSPSPEGLGEPPAVPYPRRLVVLKQLAHSVVLAWEPPPEQVELHGFHICVNGELRQALGPGAPPKAVLENLDLWAGPLHISVQALTSRGSSDPLRCCLAVGARAGVVPSQLRVHRLTATSAEITWVPGNSNLAHAIYLNGEECPPASPSTYWATFCHLRPGTPYQAQVEAQLPPQGPWEPGWERLEQRAATLQFTTLPAGPPDAPLDVQIEPGPSPGILIISWLPVTIDAAGTSNGVRVTGYAIYADGQKIMEVASPTAGSVLVELSQLQLLQVCREVVVRTMSPHGESADSIPAPITPALAPASLPARVSCPSPHPSPEARAPLASASPGPGDPSSPLQHPAPLGTQEPPGAPPASPSREMAKGSHEDPPAPCSQEEAGAAVLGTSEERTASTSTLGEKDPGPAAPSLAKQEAEWTAGEACPASSSTQGARAQQAPNTEMCQGGDPGSGLRPRAEKEDTAELGVHLVNSLVDHGRNSDLSDIQEEEEEEEEEEEEELGSRTCSFQKQVAGNSIRENGAKSQPDPFCETDSDEEILEQILELPLQQFCSKKLFSIPEEEEEEEEDEEEEKSGAGCSSRDPGPPEPALLGLGCDSGQPRRPGQCPLSPESSRAGDCLEDMPGLVGGSSRRRGGGSPEKPPSRRRPPDPREHCSRLLSNNGPQASGRLGPTRERGGLPVIEGPRTGLEASGRGRLGPSRRCSRGRALEPGLASCLSPKCLEISIEYDSEDEQEAGSGGISITSSCYPGDGEAWGTATVGRPRGPPKANSGPKPYPRLPAWEKGEPERRGRSATGRAKEPLSRATETGEARGQDGSGRRGPQKRGVRVLRPSTAELVPARSPSETLAYQHLPVRIFVALFDYDPVSMSPNPDAGEEELPFREGQILKVFGDKDADGFYQGEGGGRTGYIPCNMVAEVAVDSPAGRQQLLQRGYLSPDILLEGSGNGPFVYSTAHTTGPPPKPRRSKKAESEGPAQPCPGPPKLVPSADLKAPHSMVAAFDYNPQESSPNMDVEAELPFRAGDVITVFGGMDDDGFYYGELNGQRGLVPSNFLEGPGPEAGGLDREPRTPQAESQRTRRRRVQC*