ENST00000268893.10 TSPOAP1

Information
Transcript ID
ENST00000268893.10
Genome
hg38
Position
chr17:58,301,231-58,328,760
Strand
-
CDS length
5,394
Amino acid length
1,798
Gene symbol
TSPOAP1
Gene type
protein-coding
Gene description
TSPO associated protein 1
Gene Entrez Gene ID
9256
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
31 58,301,231 58,302,447
30 58,304,338 58,304,399
29 58,305,061 58,305,171
28 58,305,387 58,305,458
27 58,305,540 58,305,643
26 58,305,833 58,305,865
25 58,306,342 58,306,413
24 58,306,800 58,306,968
23 58,307,611 58,307,762
22 58,307,842 58,307,941
21 58,308,541 58,309,380
20 58,309,967 58,310,158
19 58,310,512 58,310,751
18 58,310,836 58,311,213
17 58,311,571 58,311,722
16 58,311,892 58,312,722
15 58,316,023 58,316,132
14 58,316,425 58,316,540
13 58,318,280 58,318,452
12 58,319,090 58,319,294
11 58,320,109 58,320,129
10 58,320,531 58,320,581
9 58,322,308 58,322,412
8 58,322,654 58,322,776
7 58,322,950 58,323,039
6 58,323,298 58,323,381
5 58,323,468 58,323,545
4 58,324,811 58,325,002
3 58,326,293 58,326,421
2 58,326,683 58,326,790
1 58,327,588 58,328,760
CDS
Exon number Type Start Stop
30 CDS 58,304,370 58,304,399
29 CDS 58,305,061 58,305,171
28 CDS 58,305,387 58,305,458
27 CDS 58,305,540 58,305,643
26 CDS 58,305,833 58,305,865
25 CDS 58,306,342 58,306,413
24 CDS 58,306,800 58,306,968
23 CDS 58,307,611 58,307,762
22 CDS 58,307,842 58,307,941
21 CDS 58,308,541 58,309,380
20 CDS 58,309,967 58,310,158
19 CDS 58,310,512 58,310,751
18 CDS 58,310,836 58,311,213
17 CDS 58,311,571 58,311,722
16 CDS 58,311,892 58,312,722
15 CDS 58,316,023 58,316,132
14 CDS 58,316,425 58,316,540
13 CDS 58,318,280 58,318,452
12 CDS 58,319,090 58,319,294
11 CDS 58,320,109 58,320,129
10 CDS 58,320,531 58,320,581
9 CDS 58,322,308 58,322,412
8 CDS 58,322,654 58,322,776
7 CDS 58,322,950 58,323,039
6 CDS 58,323,298 58,323,381
5 CDS 58,323,468 58,323,545
4 CDS 58,324,811 58,325,002
3 CDS 58,326,293 58,326,421
2 CDS 58,326,683 58,326,790
1 CDS 58,327,588 58,327,920
Other genome
Genome Chromosome Start End Links
hg19 chr17 56,378,592 56,406,121 Link
CDS sequence
ATGGAGCAACTGACAACCCTCCCACGGCCTGGGGACCCTGGAGCCATGGAGCCATGGGCACTGCCCACCTGGCATAGCTGGACTCCAGGTCGAGGGGGTGAACCTAGCAGTGCAGCCCCAAGCATCGCTGATACTCCTCCGGCAGCTCTGCAGCTTCAAGAACTGAGGTCTGAGGAGAGTTCCAAGCCCAAAGGAGACGGGAGCTCCAGGCCCGTGGGGGGAACTGACCCTGAAGGAGCAGAGGCTTGTCTGCCCAGCCTGGGCCAGCAAGCATCCAGCTCTGGACCCGCCTGCCAGAGGCCAGAGGATGAGGAAGTGGAGGCTTTCCTGAAGGCCAAGCTGAATATGAGCTTTGGGGACAGGCCCAATCTGGAGCTGCTGAGGGCCCTGGGGGAGCTGCGGCAGCGCTGTGCCATCCTTAAGGAGGAAAACCAGATGCTGAGGAAGAGCAGCTTCCCTGAGACAGAAGAGAAGGTGCGGAGGCTGAAGAGGAAGAACGCCGAGCTGGCGGTCATTGCCAAGCGCCTGGAGGAGAGGGCCCGAAAGCTGCAGGAAACGAACCTGAGGGTGGAGGGTCCCCAGTGGCTCCACGTGCGGGACTTCGATCGGCTGCTGCGCGAGTCCCAGCGGGAGGTGCTGCGGCTGCAGAGGCAGATCGCGCTGCGCAACCAGCGGGAGACGCTCCCGCTCCCGCCGTCCTGGCCCCCGGGCCCTGCTCTCCAGGCCAGAGCAGGGGCGCCTGCTCCCGGGGCCCCGGGAGAGGCCACGCCCCAGGAGGATGCGGACAACCTACCCGTGATTCTAGGGGAGCCAGAGAAAGAGCAGAGGGTGCAGCAGCTGGAATCGGAGCTCAGCAAGAAGCGGAAGAAATGCGAGAGCCTGGAGCAGGAAGCCCGGAAAAAGCAGAGGCGATGTGAGGAGCTGGAACTGCAGCTGAGACAAGCGCAGAATGAGAATGCCCGCCTGGTGGAGGAGAACTCCCGGCTCAGTGGGAGAGCCACAGAGAAGGAGCAGGTGGAGTGGGAGAATGCGGAGCTGAGGGGCCAGCTCCTGGGGGTGACACAGGAGAGGGACTCAGCCCTTCGCAAGAGCCAGGGCCTGCAGAGCAAGCTGGAGAGCCTGGAGCAAGTGCTGAAGCACATGCGGGAGGTGGCCCAGCGGCGGCAGCAGCTGGAGGTGGAGCATGAACAGGCTCGGCTCAGCCTACGGGAGAAGCAGGAGGAGGTCCGGAGACTGCAGCAGGCCCAGGCTGAAGCCCAGAGGGAACATGAAGGAGCCGTGCAGCTGCTGGAGTCTACCTTGGATTCCATGCAGGCCCGGGTTCGAGAGCTCGAAGAACAGTGCCGCAGCCAAACCGAGCAGTTCAGCCTCCTGGCACAGGAACTCCAGGCTTTCCGCCTGCACCCGGGCCCCTTGGATCTGCTCACATCTGCCCTGGACTGTGGGAGCCTTGGAGACTGCCCACCACCCCCCTGCTGCTGCTCCATTCCCCAGCCTTGCCGGGGGTCTGGCCCCAAAGACCTTGACCTCCCGCCGGGCTCCCCTGGGCGCTGCACCCCAAAGTCTTCCGAGCCTGCCCCTGCCACTCTCACTGGGGTCCCTCGAAGGACAGCCAAGAAGGCAGAGTCTCTCTCCAACTCCTCCCACTCCGAGTCCATCCACAACAGCCCCAAGTCATGCCCTACACCTGAGGTGGACACAGCCAGTGAGGTAGAGGAGCTGGAGGCAGACAGTGTCTCCCTGCTCCCAGCTGCGCCAGAGGGCAGCCGGGGAGGAGCCAGGATCCAGGTCTTCCTAGCACGTTATAGCTACAACCCCTTTGAGGGTCCCAATGAGAATCCAGAAGCAGAGCTTCCGCTGACAGCTGGCGAGTACATCTACATCTATGGCAACATGGATGAGGATGGCTTTTTTGAAGGAGAGCTCATGGATGGCCGAAGGGGCCTGGTCCCTTCCAATTTTGTAGAGCGTGTGTCGGATGATGACCTCCTGACCTCCCTCCCTCCAGAGCTGGCCGATTTGTCCCACAGCTCAGGCCCTGAACTCAGTTTCCTGAGTGTAGGTGGGGGTGGCAGCAGTAGCGGGGGCCAAAGCAGTGTGGGAAGGAGCCAGCCCAGACCTGAGGAGGAGGATGCAGGGGACGAGCTCAGTCTGAGCCCATCACCGGAGGGCCTGGGCGAGCCTCCTGCCGTGCCTTACCCCCGCCGTCTGGTGGTCCTCAAGCAGCTGGCCCACAGCGTGGTGCTGGCCTGGGAGCCGCCTCCTGAGCAAGTGGAGCTACACGGCTTCCATATCTGTGTGAATGGGGAGCTGCGACAGGCCCTGGGGCCTGGGGCGCCACCCAAGGCCGTGCTGGAGAACCTGGACCTGTGGGCCGGGCCCCTTCACATTTCTGTCCAGGCCCTGACTAGCCGGGGCAGCTCTGACCCACTGCGCTGTTGCTTGGCGGTGGGTGCCCGGGCCGGAGTGGTGCCCAGCCAGCTGCGGGTCCATCGGTTGACAGCCACATCTGCTGAGATCACCTGGGTGCCCGGCAATAGCAACTTGGCCCATGCCATCTACCTCAATGGGGAAGAGTGCCCACCTGCCAGCCCCAGTACCTACTGGGCCACCTTCTGCCACTTACGGCCTGGCACACCCTATCAGGCCCAAGTGGAGGCTCAGCTCCCACCCCAAGGGCCCTGGGAACCAGGCTGGGAGAGGCTGGAGCAGCGGGCTGCCACCCTGCAGTTCACCACACTCCCAGCAGGCCCACCTGATGCCCCTCTGGATGTGCAGATCGAGCCTGGGCCCTCCCCTGGGATCTTGATCATCAGTTGGCTCCCAGTCACCATCGATGCTGCTGGCACATCCAACGGTGTCCGGGTCACAGGCTATGCCATCTACGCTGATGGGCAGAAGATCATGGAGGTGGCCTCACCCACGGCAGGCAGTGTACTGGTGGAGTTGTCCCAGCTGCAGCTGCTGCAGGTGTGTCGTGAGGTGGTCGTGCGCACCATGTCGCCCCACGGGGAGTCGGCGGACTCCATCCCGGCTCCTATCACTCCCGCCCTGGCTCCGGCCAGCCTGCCAGCCCGAGTCTCCTGCCCCTCACCGCACCCAAGCCCAGAGGCCAGAGCGCCCCTTGCTTCAGCCTCCCCAGGGCCTGGAGACCCCAGCTCTCCTCTCCAGCACCCTGCTCCCCTTGGAACTCAAGAGCCTCCAGGAGCACCCCCTGCAAGCCCTTCCAGAGAGATGGCAAAAGGGTCCCACGAGGACCCTCCAGCACCTTGCTCCCAGGAGGAGGCTGGGGCAGCAGTGCTGGGCACCTCAGAGGAGAGGACAGCCAGCACATCTACCCTGGGTGAGAAGGACCCTGGCCCCGCAGCTCCCTCACTGGCCAAGCAGGAGGCCGAGTGGACTGCAGGAGAGGCCTGTCCGGCCTCCAGCTCCACCCAGGGAGCACGGGCCCAGCAGGCGCCAAATACCGAGATGTGCCAAGGAGGAGACCCAGGGTCTGGGCTGAGGCCCAGGGCTGAGAAGGAGGACACAGCAGAGCTTGGGGTTCATCTGGTGAACTCCCTCGTGGACCACGGCCGCAACTCAGACCTGTCAGACATCCAGGAGGAAGAGGAAGAGGAGGAGGAGGAGGAGGAAGAGGAGCTGGGTTCCAGGACTTGCTCCTTCCAGAAGCAGGTTGCTGGCAACAGCATCAGGGAGAATGGGGCCAAGTCCCAGCCCGACCCCTTTTGTGAGACTGACAGCGATGAGGAGATCTTGGAGCAGATCCTGGAGCTGCCCCTCCAGCAGTTCTGTAGCAAGAAGCTCTTTAGCATCCCGGAGGAGGAGGAAGAGGAAGAGGAGGACGAGGAGGAGGAGAAGTCAGGGGCAGGCTGTTCTTCCCGAGACCCTGGCCCGCCTGAACCTGCATTGCTGGGGCTGGGCTGTGACAGTGGTCAGCCCCGAAGACCTGGCCAGTGTCCCTTGTCTCCTGAGTCCTCCAGGGCTGGAGACTGCCTGGAAGACATGCCTGGATTAGTTGGTGGAAGCAGCCGGAGGAGAGGAGGGGGCTCCCCTGAGAAGCCCCCAAGCCGCAGGCGGCCTCCAGATCCCCGAGAACACTGCAGCCGACTTCTCAGCAACAATGGGCCCCAGGCCTCTGGACGACTGGGCCCCACACGGGAGAGGGGTGGCCTCCCCGTAATTGAGGGCCCCAGGACTGGACTAGAGGCTAGCGGGAGAGGCCGGCTGGGCCCTTCCCGGAGGTGCTCCCGTGGCCGGGCGCTGGAGCCTGGCCTGGCCAGCTGCCTTTCCCCCAAGTGCTTGGAAATCAGCATTGAATATGATTCGGAGGATGAGCAGGAGGCGGGCAGCGGGGGCATCAGCATCACCAGCTCCTGCTACCCTGGAGATGGGGAGGCCTGGGGCACAGCAACTGTAGGAAGGCCCAGGGGGCCTCCGAAGGCCAATTCAGGCCCCAAGCCCTACCCACGCCTCCCAGCCTGGGAGAAAGGGGAACCAGAGCGGAGAGGCCGCAGTGCGACGGGCAGAGCCAAGGAGCCACTCTCCCGGGCAACAGAGACCGGAGAGGCCAGAGGGCAGGACGGCTCTGGGCGGAGGGGCCCCCAGAAGAGAGGTGTCCGAGTCCTCAGGCCAAGCACTGCAGAGCTAGTCCCTGCGAGGAGCCCCTCAGAAACACTGGCTTACCAGCACCTACCCGTCAGGATCTTTGTGGCTCTGTTTGACTATGACCCCGTGTCAATGTCGCCCAATCCTGATGCTGGAGAAGAAGAGCTTCCCTTCCGAGAGGGTCAGATCCTGAAGGTGTTTGGGGACAAGGATGCCGATGGCTTCTACCAGGGCGAAGGTGGGGGCCGGACAGGCTACATTCCCTGCAACATGGTGGCTGAGGTGGCTGTGGACAGCCCTGCTGGGAGACAGCAACTGCTCCAGCGGGGTTATTTGTCCCCAGATATTCTCCTTGAGGGCTCAGGGAATGGTCCGTTTGTGTACTCCACAGCCCACACAACTGGGCCTCCTCCCAAGCCCCGCCGCTCCAAGAAAGCTGAGTCGGAAGGCCCTGCCCAGCCCTGTCCAGGCCCCCCTAAGCTGGTCCCCTCTGCTGACCTGAAAGCTCCCCACTCCATGGTGGCTGCATTTGACTACAACCCCCAGGAGAGTTCCCCCAATATGGACGTGGAGGCAGAGCTGCCCTTCCGGGCAGGGGATGTCATTACTGTGTTTGGGGGCATGGACGATGACGGTTTCTACTATGGGGAATTAAATGGACAAAGGGGCCTGGTTCCATCCAACTTCCTGGAGGGCCCTGGGCCTGAGGCAGGCGGCCTGGACAGGGAACCCAGGACACCCCAGGCTGAGAGTCAGAGAACGAGGAGGAGAAGAGTCCAGTGCTAG
Amino sequence
MEQLTTLPRPGDPGAMEPWALPTWHSWTPGRGGEPSSAAPSIADTPPAALQLQELRSEESSKPKGDGSSRPVGGTDPEGAEACLPSLGQQASSSGPACQRPEDEEVEAFLKAKLNMSFGDRPNLELLRALGELRQRCAILKEENQMLRKSSFPETEEKVRRLKRKNAELAVIAKRLEERARKLQETNLRVEGPQWLHVRDFDRLLRESQREVLRLQRQIALRNQRETLPLPPSWPPGPALQARAGAPAPGAPGEATPQEDADNLPVILGEPEKEQRVQQLESELSKKRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEKEQVEWENAELRGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQLEVEHEQARLSLREKQEEVRRLQQAQAEAQREHEGAVQLLESTLDSMQARVRELEEQCRSQTEQFSLLAQELQAFRLHPGPLDLLTSALDCGSLGDCPPPPCCCSIPQPCRGSGPKDLDLPPGSPGRCTPKSSEPAPATLTGVPRRTAKKAESLSNSSHSESIHNSPKSCPTPEVDTASEVEELEADSVSLLPAAPEGSRGGARIQVFLARYSYNPFEGPNENPEAELPLTAGEYIYIYGNMDEDGFFEGELMDGRRGLVPSNFVERVSDDDLLTSLPPELADLSHSSGPELSFLSVGGGGSSSGGQSSVGRSQPRPEEEDAGDELSLSPSPEGLGEPPAVPYPRRLVVLKQLAHSVVLAWEPPPEQVELHGFHICVNGELRQALGPGAPPKAVLENLDLWAGPLHISVQALTSRGSSDPLRCCLAVGARAGVVPSQLRVHRLTATSAEITWVPGNSNLAHAIYLNGEECPPASPSTYWATFCHLRPGTPYQAQVEAQLPPQGPWEPGWERLEQRAATLQFTTLPAGPPDAPLDVQIEPGPSPGILIISWLPVTIDAAGTSNGVRVTGYAIYADGQKIMEVASPTAGSVLVELSQLQLLQVCREVVVRTMSPHGESADSIPAPITPALAPASLPARVSCPSPHPSPEARAPLASASPGPGDPSSPLQHPAPLGTQEPPGAPPASPSREMAKGSHEDPPAPCSQEEAGAAVLGTSEERTASTSTLGEKDPGPAAPSLAKQEAEWTAGEACPASSSTQGARAQQAPNTEMCQGGDPGSGLRPRAEKEDTAELGVHLVNSLVDHGRNSDLSDIQEEEEEEEEEEEEELGSRTCSFQKQVAGNSIRENGAKSQPDPFCETDSDEEILEQILELPLQQFCSKKLFSIPEEEEEEEEDEEEEKSGAGCSSRDPGPPEPALLGLGCDSGQPRRPGQCPLSPESSRAGDCLEDMPGLVGGSSRRRGGGSPEKPPSRRRPPDPREHCSRLLSNNGPQASGRLGPTRERGGLPVIEGPRTGLEASGRGRLGPSRRCSRGRALEPGLASCLSPKCLEISIEYDSEDEQEAGSGGISITSSCYPGDGEAWGTATVGRPRGPPKANSGPKPYPRLPAWEKGEPERRGRSATGRAKEPLSRATETGEARGQDGSGRRGPQKRGVRVLRPSTAELVPARSPSETLAYQHLPVRIFVALFDYDPVSMSPNPDAGEEELPFREGQILKVFGDKDADGFYQGEGGGRTGYIPCNMVAEVAVDSPAGRQQLLQRGYLSPDILLEGSGNGPFVYSTAHTTGPPPKPRRSKKAESEGPAQPCPGPPKLVPSADLKAPHSMVAAFDYNPQESSPNMDVEAELPFRAGDVITVFGGMDDDGFYYGELNGQRGLVPSNFLEGPGPEAGGLDREPRTPQAESQRTRRRRVQC*