ENST00000301671.12 GHDC

Information
Transcript ID
ENST00000301671.12
Genome
hg19
Position
chr17:40,341,106-40,346,213
Strand
-
CDS length
1,593
Amino acid length
531
Gene symbol
GHDC
Gene type
protein-coding
Gene description
GH3 domain containing
Gene Entrez Gene ID
84514
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
9 40,341,106 40,341,939
8 40,342,203 40,342,288
7 40,342,642 40,342,775
6 40,342,850 40,342,921
5 40,343,036 40,343,228
4 40,344,259 40,344,760
3 40,344,924 40,345,045
2 40,345,335 40,345,612
1 40,345,785 40,346,213
CDS
Exon number Type Start Stop
9 CDS 40,341,721 40,341,939
8 CDS 40,342,203 40,342,288
7 CDS 40,342,642 40,342,775
6 CDS 40,342,850 40,342,921
5 CDS 40,343,036 40,343,228
4 CDS 40,344,259 40,344,760
3 CDS 40,344,924 40,345,045
2 CDS 40,345,335 40,345,599
Other genome
Genome Chromosome Start End Links
hg38 chr17 42,189,088 42,194,195 Link
CDS sequence
ATGCTGCTGTGGCCACTGCTGCTGCTGCTGCTGCTGCTGCCAACATTGGCCCTGCTCAGGCAGCAGCGGTCCCAGGATGCCAGGCTGTCCTGGCTTGCTGGCCTCCAGCACCGAGTGGCATGGGGGGCCCTGGTCTGGGCAGCCACCTGGCAGCGGCGGAGGCTGGAGCAGAGCACGCTCCATGTGCACCAGAGCCAGCAGCAGGCCCTGAGGTGGTGTCTACAGGGAGCCCAGCGCCCCCACTGTTCCCTCAGAAGGAGCACAGACATAAGCACCTTCCGGAATCATCTCCCTCTGACCAAGGCCAGCCAGACCCAGCAGGAAGACAGTGGAGAGCAGCCACTGCCCCCGACCTCAAACCAGGACCTTGGGGAGGCCTCTCTGCAGGCCACCTTGCTGGGTCTGGCAGCCCTAAACAAGGCCTACCCAGAAGTGCTGGCTCAGGGACGCACTGCCCGTGTGACGCTTACATCCCCTTGGCCCCGACCCCTGCCTTGGCCTGGGAATACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCTGCTGCTGGACGCACTGAGGTCCCCAGGGCTGAGGGCACTGGAGGCTGGGACGGCTGTCGAACTTCTGGATGTTTTCTTGGGCCTGGAGACTGATGGTGAAGAGCTAGCTGGGGCGATAGCTGCCGGGAACCCTGGAGCGCCTCTCCGTGAACGGGCAGCTGAGCTCCGGGAGGCCCTAGAGCAGGGGCCACGGGGACTGGCCCTTCGGCTCTGGCCAAAGCTGCAGGTGGTGGTGACTCTGGATGCAGGAGGCCAGGCCGAGGCTGTGGCTGCCCTCGGGGCCTTGTGGTGCCAAGGACTAGCCTTCTTCTCTCCTGCTTATGCTGCCTCGGGAGGGGTGCTGGGCCTAAACCTACAGCCAGAGCAGCCCCATGGGCTCTACCTTCTGCCCCCTGGGGCCCCCTTTATCGAGCTGCTCCCAGTCAAGGAAGGCACCCAGGAGGAAGCTGCCTCCACCCTCCTTTTGGCCGAGGCCCAGCAGGGCAAGGAGTATGAGCTGGTGCTGACGGACCGCGCCAGCCTCACCAGGTGCCGCCTGGGTGATGTGGTGCGAGTGGTTGGTGCCTACAATCAGTGTCCAGTCGTCAGGTTCATCTGCAGGCTGGACCAGACCCTGAGTGTGCGAGGGGAAGATATTGGTGAAGACCTGTTCTCTGAGGCCCTGGGCCGGGCAGTGGGGCAGTGGGCGGGGGCCAAGCTGCTGGACCATGGCTGTGTGGAGAGCAGCATTCTGGATTCCTCTGCGGGCTCTGCTCCCCACTACGAGGTGTTTGTGGCGCTGAGGGGGCTGAGGAATCTGTCAGAGGAAAATCGAGACAAGCTGGACCACTGCCTTCAGGAAGCCTCTCCCCGCTACAAGTCCCTGCGGTTCTGGGGCAGCGTGGGCCCTGCCAGAGTCCACCTGGTGGGGCAGGGAGCCTTCCGAGCACTCCGGGCAGCCCTCGCTGCCTGCCCCTCCTCCCCCTTCCCCCCTGCGATGCCCCGGGTCCTTCGGCACAGGCACCTGGCCCAGTGTCTGCAGGAGAGGGTGGTGTCCTGA
Amino sequence
MLLWPLLLLLLLLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVWAATWQRRRLEQSTLHVHQSQQQALRWCLQGAQRPHCSLRRSTDISTFRNHLPLTKASQTQQEDSGEQPLPPTSNQDLGEASLQATLLGLAALNKAYPEVLAQGRTARVTLTSPWPRPLPWPGNTLGQVGTPGTKDPRALLLDALRSPGLRALEAGTAVELLDVFLGLETDGEELAGAIAAGNPGAPLRERAAELREALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSPAYAASGGVLGLNLQPEQPHGLYLLPPGAPFIELLPVKEGTQEEAASTLLLAEAQQGKEYELVLTDRASLTRCRLGDVVRVVGAYNQCPVVRFICRLDQTLSVRGEDIGEDLFSEALGRAVGQWAGAKLLDHGCVESSILDSSAGSAPHYEVFVALRGLRNLSEENRDKLDHCLQEASPRYKSLRFWGSVGPARVHLVGQGAFRALRAALAACPSSPFPPAMPRVLRHRHLAQCLQERVVS*