ENST00000301671.12 GHDC

Information
Transcript ID
ENST00000301671.12
Genome
hg38
Position
chr17:42,189,088-42,194,195
Strand
-
CDS length
1,593
Amino acid length
531
Gene symbol
GHDC
Gene type
protein-coding
Gene description
GH3 domain containing
Gene Entrez Gene ID
84514
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
9 42,189,088 42,189,921
8 42,190,185 42,190,270
7 42,190,624 42,190,757
6 42,190,832 42,190,903
5 42,191,018 42,191,210
4 42,192,241 42,192,742
3 42,192,906 42,193,027
2 42,193,317 42,193,594
1 42,193,767 42,194,195
CDS
Exon number Type Start Stop
9 CDS 42,189,703 42,189,921
8 CDS 42,190,185 42,190,270
7 CDS 42,190,624 42,190,757
6 CDS 42,190,832 42,190,903
5 CDS 42,191,018 42,191,210
4 CDS 42,192,241 42,192,742
3 CDS 42,192,906 42,193,027
2 CDS 42,193,317 42,193,581
Other genome
Genome Chromosome Start End Links
hg19 chr17 40,341,106 40,346,213 Link
CDS sequence
ATGCTGCTGTGGCCACTGCTGCTGCTGCTGCTGCTGCTGCCAACATTGGCCCTGCTCAGGCAGCAGCGGTCCCAGGATGCCAGGCTGTCCTGGCTTGCTGGCCTCCAGCACCGAGTGGCATGGGGGGCCCTGGTCTGGGCAGCCACCTGGCAGCGGCGGAGGCTGGAGCAGAGCACGCTCCATGTGCACCAGAGCCAGCAGCAGGCCCTGAGGTGGTGTCTACAGGGAGCCCAGCGCCCCCACTGTTCCCTCAGAAGGAGCACAGACATAAGCACCTTCCGGAATCATCTCCCTCTGACCAAGGCCAGCCAGACCCAGCAGGAAGACAGTGGAGAGCAGCCACTGCCCCCGACCTCAAACCAGGACCTTGGGGAGGCCTCTCTGCAGGCCACCTTGCTGGGTCTGGCAGCCCTAAACAAGGCCTACCCAGAAGTGCTGGCTCAGGGACGCACTGCCCGTGTGACGCTTACATCCCCTTGGCCCCGACCCCTGCCTTGGCCTGGGAATACCCTGGGCCAGGTGGGCACCCCTGGAACCAAGGACCCTAGGGCCCTGCTGCTGGACGCACTGAGGTCCCCAGGGCTGAGGGCACTGGAGGCTGGGACGGCTGTCGAACTTCTGGATGTTTTCTTGGGCCTGGAGACTGATGGTGAAGAGCTAGCTGGGGCGATAGCTGCCGGGAACCCTGGAGCGCCTCTCCGTGAACGGGCAGCTGAGCTCCGGGAGGCCCTAGAGCAGGGGCCACGGGGACTGGCCCTTCGGCTCTGGCCAAAGCTGCAGGTGGTGGTGACTCTGGATGCAGGAGGCCAGGCCGAGGCTGTGGCTGCCCTCGGGGCCTTGTGGTGCCAAGGACTAGCCTTCTTCTCTCCTGCTTATGCTGCCTCGGGAGGGGTGCTGGGCCTAAACCTACAGCCAGAGCAGCCCCATGGGCTCTACCTTCTGCCCCCTGGGGCCCCCTTTATCGAGCTGCTCCCAGTCAAGGAAGGCACCCAGGAGGAAGCTGCCTCCACCCTCCTTTTGGCCGAGGCCCAGCAGGGCAAGGAGTATGAGCTGGTGCTGACGGACCGCGCCAGCCTCACCAGGTGCCGCCTGGGTGATGTGGTGCGAGTGGTTGGTGCCTACAATCAGTGTCCAGTCGTCAGGTTCATCTGCAGGCTGGACCAGACCCTGAGTGTGCGAGGGGAAGATATTGGTGAAGACCTGTTCTCTGAGGCCCTGGGCCGGGCAGTGGGGCAGTGGGCGGGGGCCAAGCTGCTGGACCATGGCTGTGTGGAGAGCAGCATTCTGGATTCCTCTGCGGGCTCTGCTCCCCACTACGAGGTGTTTGTGGCGCTGAGGGGGCTGAGGAATCTGTCAGAGGAAAATCGAGACAAGCTGGACCACTGCCTTCAGGAAGCCTCTCCCCGCTACAAGTCCCTGCGGTTCTGGGGCAGCGTGGGCCCTGCCAGAGTCCACCTGGTGGGGCAGGGAGCCTTCCGAGCACTCCGGGCAGCCCTCGCTGCCTGCCCCTCCTCCCCCTTCCCCCCTGCGATGCCCCGGGTCCTTCGGCACAGGCACCTGGCCCAGTGTCTGCAGGAGAGGGTGGTGTCCTGA
Amino sequence
MLLWPLLLLLLLLPTLALLRQQRSQDARLSWLAGLQHRVAWGALVWAATWQRRRLEQSTLHVHQSQQQALRWCLQGAQRPHCSLRRSTDISTFRNHLPLTKASQTQQEDSGEQPLPPTSNQDLGEASLQATLLGLAALNKAYPEVLAQGRTARVTLTSPWPRPLPWPGNTLGQVGTPGTKDPRALLLDALRSPGLRALEAGTAVELLDVFLGLETDGEELAGAIAAGNPGAPLRERAAELREALEQGPRGLALRLWPKLQVVVTLDAGGQAEAVAALGALWCQGLAFFSPAYAASGGVLGLNLQPEQPHGLYLLPPGAPFIELLPVKEGTQEEAASTLLLAEAQQGKEYELVLTDRASLTRCRLGDVVRVVGAYNQCPVVRFICRLDQTLSVRGEDIGEDLFSEALGRAVGQWAGAKLLDHGCVESSILDSSAGSAPHYEVFVALRGLRNLSEENRDKLDHCLQEASPRYKSLRFWGSVGPARVHLVGQGAFRALRAALAACPSSPFPPAMPRVLRHRHLAQCLQERVVS*