ENST00000321105.10 TOP3A

Information
Transcript ID
ENST00000321105.10
Genome
hg38
Position
chr17:18,271,428-18,314,994
Strand
-
CDS length
3,006
Amino acid length
1,002
Gene symbol
TOP3A
Gene type
protein-coding
Gene description
DNA topoisomerase III alpha
Gene Entrez Gene ID
7156
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
19 18,271,428 18,274,980
18 18,277,675 18,278,357
17 18,280,536 18,280,658
16 18,282,698 18,282,841
15 18,285,142 18,285,307
14 18,285,407 18,285,520
13 18,290,557 18,290,686
12 18,290,842 18,291,027
11 18,292,645 18,292,852
10 18,294,703 18,294,785
9 18,299,559 18,299,633
8 18,301,885 18,301,985
7 18,302,264 18,302,434
6 18,302,580 18,302,723
5 18,305,112 18,305,220
4 18,306,891 18,306,966
3 18,308,351 18,308,424
2 18,308,882 18,308,941
1 18,314,599 18,314,994
CDS
Exon number Type Start Stop
19 CDS 18,274,802 18,274,980
18 CDS 18,277,675 18,278,357
17 CDS 18,280,536 18,280,658
16 CDS 18,282,698 18,282,841
15 CDS 18,285,142 18,285,307
14 CDS 18,285,407 18,285,520
13 CDS 18,290,557 18,290,686
12 CDS 18,290,842 18,291,027
11 CDS 18,292,645 18,292,852
10 CDS 18,294,703 18,294,785
9 CDS 18,299,559 18,299,633
8 CDS 18,301,885 18,301,985
7 CDS 18,302,264 18,302,434
6 CDS 18,302,580 18,302,723
5 CDS 18,305,112 18,305,220
4 CDS 18,306,891 18,306,966
3 CDS 18,308,351 18,308,424
2 CDS 18,308,882 18,308,941
1 CDS 18,314,599 18,314,778
Other genome
Genome Chromosome Start End Links
hg19 chr17 18,174,742 18,218,308 Link
CDS sequence
ATGATCTTTCCTGTCGCCCGCTACGCGCTCCGGTGGCTGCGACGGCCCGAAGACCGTGCCTTTTCCCGCGCCGCCATGGAGATGGCCCTCCGAGGCGTGCGGAAAGTCCTCTGTGTGGCCGAAAAAAACGACGCGGCCAAGGGGATCGCCGACCTGCTGTCAAACGGTCGCATGAGGCGGAGAGAAGGACTTTCAAAATTCAACAAGATCTATGAATTTGATTATCATCTGTATGGCCAGAATGTTACCATGGTAATGACTTCAGTTTCTGGACATTTACTGGCTCATGATTTCCAGATGCAGTTTCGAAAATGGCAGAGCTGCAACCCTCTTGTCCTCTTTGAAGCAGAAATTGAAAAGTACTGCCCAGAGAATTTTGTAGACATCAAGAAAACTTTGGAACGAGAGACTCGCCAGTGCCAGGCTCTGGTGATCTGGACTGACTGTGATAGAGAAGGCGAAAACATCGGGTTTGAGATTATCCACGTGTGTAAGGCTGTAAAGCCCAATCTGCAGGTGTTGCGAGCCCGATTCTCTGAGATCACACCCCATGCCGTCAGGACAGCTTGTGAAAACCTGACCGAGCCTGATCAGAGGGTGAGCGATGCTGTGGATGTGAGGCAGGAGCTGGACCTGAGGATTGGAGCTGCCTTTACTAGGTTCCAGACCCTGCGGCTTCAGAGGATTTTTCCTGAGGTGCTGGCAGAGCAGCTCATCAGTTACGGCAGCTGCCAGTTCCCCACACTGGGCTTTGTGGTGGAGCGGTTCAAAGCCATTCAGGCTTTTGTACCAGAAATCTTCCACAGAATTAAAGTAACTCATGACCACAAAGATGGTATCGTAGAATTCAACTGGAAAAGGCATCGACTCTTTAACCACACGGCTTGCCTAGTTCTCTATCAGTTGTGTGTGGAGGATCCCATGGCAACTGTGGTAGAGGTCAGATCTAAGCCCAAGAGCAAGTGGCGGCCTCAAGCCTTGGACACTGTGGAGCTTGAGAAGCTGGCTTCTCGAAAGTTGAGAATAAATGCTAAAGAAACCATGAGGATTGCTGAGAAGCTCTACACTCAAGGGTACATCAGCTATCCCCGAACAGAAACAAACATTTTTCCCAGAGACTTAAACCTGACGGTGTTGGTGGAACAGCAGACCCCCGATCCACGCTGGGGGGCCTTTGCCCAGAGCATTCTAGAGCGGGGTGGTCCCACCCCACGCAATGGGAACAAGTCTGACCAAGCTCACCCTCCCATTCACCCCACCAAATACACCAACAACTTACAGGGAGATGAACAGCGACTGTACGAGTTTATTGTTCGCCATTTCCTGGCTTGCTGCTCCCAGGATGCTCAGGGGCAGGAGACCACAGTGGAGATCGACATCGCTCAGGAACGCTTTGTGGCCCATGGCCTCATGATTCTGGCCCGAAACTATCTGGATGTGTATCCATATGATCACTGGAGTGACAAGATCCTCCCTGTCTATGAGCAAGGATCCCACTTTCAGCCCAGCACCGTGGAGATGGTGGACGGGGAGACCAGCCCACCCAAGCTGCTCACCGAGGCCGACCTCATTGCCCTCATGGAGAAGCATGGCATTGGTACGGATGCCACTCATGCGGAGCACATCGAGACCATCAAAGCCCGGATGTACGTGGGCCTCACCCCAGACAAGCGGTTCCTCCCTGGGCACCTGGGCATGGGACTTGTGGAAGGTTATGATTCCATGGGCTATGAAATGTCTAAGCCTGACCTCCGGGCTGAACTGGAAGCTGATCTGAAGCTGATCTGTGATGGCAAAAAGGACAAATTTGTGGTTCTAAGGCAGCAAGTGCAGAAATACAAGCAGGTTTTCATTGAAGCGGTGGCTAAAGCAAAGAAATTGGACGAGGCCTTGGCCCAGTACTTTGGGAATGGGACAGAGTTGGCCCAGCAAGAAGATATCTACCCAGCCATGCCAGAGCCCATCAGGAAGTGCCCACAGTGCAACAAGGACATGGTCCTTAAGACCAAGAAGAATGGCGGGTTCTACCTCAGCTGCATGGGTTTCCCAGAGTGTCGCTCAGCTGTGTGGCTTCCTGACTCGGTGCTGGAGGCCAGCAGGGACAGCAGTGTGTGTCCAGTTTGTCAGCCACACCCTGTGTACAGGTTAAAGTTAAAGTTTAAGCGCGGTAGCCTTCCCCCGACCATGCCTCTGGAGTTTGTTTGCTGCATCGGCGGATGCGACGACACCCTGAGGGAGATCCTGGACCTGAGATTTTCAGGGGGCCCCCCCAGGGCTAGCCAGCCCTCTGGCCGCCTGCAGGCTAACCAGTCCCTGAACAGGATGGACAACAGCCAGCACCCCCAGCCTGCTGACAGCAGACAGACTGGGTCCTCAAAGGCTCTGGCCCAGACCCTCCCACCACCCACGGCTGCTGGTGAAAGCAATTCTGTGACCTGCAACTGTGGCCAGGAGGCTGTGCTGCTCACTGTCCGTAAGGAGGGCCCCAACCGGGGCCGGCAGTTCTTTAAGTGCAACGGAGGTAGCTGCAACTTCTTCCTGTGGGCAGACAGCCCCAATCCGGGAGCAGGAGGGCCTCCTGCCTTGGCATATAGACCCCTGGGCGCCTCCCTGGGATGCCCACCAGGCCCAGGGATCCACCTAGGTGGGTTTGGCAACCCTGGTGATGGCAGTGGTAGTGGCACATCCTGCCTTTGCAGCCAGCCCTCCGTCACACGGACTGTGCAGAAGGATGGACCCAACAAGGGGCGCCAGTTCCACACATGTGCCAAGCCGAGAGAGCAGCAGTGTGGCTTTTTCCAGTGGGTCGATGAGAACACCGCTCCAGGGACTTCTGGAGCCCCGTCCTGGACAGGAGACAGAGGAAGAACCCTGGAGTCGGAAGCCAGAAGCAAAAGGCCCCGGGCCAGTTCCTCAGACATGGGGTCCACAGCAAAGAAACCCCGGAAATGCAGCCTTTGCCACCAGCCTGGACACACCCGTCCCTTTTGTCCTCAGAACAGATGA
Amino sequence
MIFPVARYALRWLRRPEDRAFSRAAMEMALRGVRKVLCVAEKNDAAKGIADLLSNGRMRRREGLSKFNKIYEFDYHLYGQNVTMVMTSVSGHLLAHDFQMQFRKWQSCNPLVLFEAEIEKYCPENFVDIKKTLERETRQCQALVIWTDCDREGENIGFEIIHVCKAVKPNLQVLRARFSEITPHAVRTACENLTEPDQRVSDAVDVRQELDLRIGAAFTRFQTLRLQRIFPEVLAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVTHDHKDGIVEFNWKRHRLFNHTACLVLYQLCVEDPMATVVEVRSKPKSKWRPQALDTVELEKLASRKLRINAKETMRIAEKLYTQGYISYPRTETNIFPRDLNLTVLVEQQTPDPRWGAFAQSILERGGPTPRNGNKSDQAHPPIHPTKYTNNLQGDEQRLYEFIVRHFLACCSQDAQGQETTVEIDIAQERFVAHGLMILARNYLDVYPYDHWSDKILPVYEQGSHFQPSTVEMVDGETSPPKLLTEADLIALMEKHGIGTDATHAEHIETIKARMYVGLTPDKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICDGKKDKFVVLRQQVQKYKQVFIEAVAKAKKLDEALAQYFGNGTELAQQEDIYPAMPEPIRKCPQCNKDMVLKTKKNGGFYLSCMGFPECRSAVWLPDSVLEASRDSSVCPVCQPHPVYRLKLKFKRGSLPPTMPLEFVCCIGGCDDTLREILDLRFSGGPPRASQPSGRLQANQSLNRMDNSQHPQPADSRQTGSSKALAQTLPPPTAAGESNSVTCNCGQEAVLLTVRKEGPNRGRQFFKCNGGSCNFFLWADSPNPGAGGPPALAYRPLGASLGCPPGPGIHLGGFGNPGDGSGSGTSCLCSQPSVTRTVQKDGPNKGRQFHTCAKPREQQCGFFQWVDENTAPGTSGAPSWTGDRGRTLESEARSKRPRASSSDMGSTAKKPRKCSLCHQPGHTRPFCPQNR*