ENST00000547865.5 SPATS2
Information
- Transcript ID
- ENST00000547865.5
- Genome
- hg19
- Position
- chr12:49,761,330-49,857,408
- Strand
- +
- CDS length
- 228
- Amino acid length
- 76
- Gene symbol
- SPATS2
- Gene type
- protein-coding
- Gene description
- spermatogenesis associated serine rich 2
- Gene Entrez Gene ID
- 65244
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
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Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
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Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
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Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
1 | 49,761,330 | 49,761,370 |
2 | 49,765,011 | 49,765,073 |
3 | 49,835,513 | 49,835,599 |
4 | 49,854,553 | 49,854,820 |
5 | 49,856,058 | 49,857,408 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
4 | CDS | 49,854,796 | 49,854,820 |
5 | CDS | 49,856,058 | 49,856,260 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg38 | chr12 | 49,367,547 | 49,463,625 | Link |
CDS sequence
ATGTCCAGGAAACAGAACCAGAAGGGAAGGAGAGCGCGAGTGAACAAGGAAGGAACTGGAGGGCATGAGTGCTGGAACCGGCTGGCTGCTTCAGTACCAGCAGGGGTGAACTCTGTGTGGGCCCCGTGGCAGCATCCAGGCTGTGGGGTGCCTGTGACCCCCGAAGCTCCAGAGGGCATGTTACAGTGCTCTTCTGGCTCTGCCATTTGTGGACGGCTTAAGTGTTAA
Amino sequence
MSRKQNQKGRRARVNKEGTGGHECWNRLAASVPAGVNSVWAPWQHPGCGVPVTPEAPEGMLQCSSGSAICGRLKC*