ENST00000547865.5 SPATS2

Information
Transcript ID
ENST00000547865.5
Genome
hg19
Position
chr12:49,761,330-49,857,408
Strand
+
CDS length
228
Amino acid length
76
Gene symbol
SPATS2
Gene type
protein-coding
Gene description
spermatogenesis associated serine rich 2
Gene Entrez Gene ID
65244
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency
TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence
Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 49,761,330 49,761,370
2 49,765,011 49,765,073
3 49,835,513 49,835,599
4 49,854,553 49,854,820
5 49,856,058 49,857,408
CDS
Exon number Type Start Stop
4 CDS 49,854,796 49,854,820
5 CDS 49,856,058 49,856,260
Other genome
Genome Chromosome Start End Links
hg38 chr12 49,367,547 49,463,625 Link
CDS sequence
ATGTCCAGGAAACAGAACCAGAAGGGAAGGAGAGCGCGAGTGAACAAGGAAGGAACTGGAGGGCATGAGTGCTGGAACCGGCTGGCTGCTTCAGTACCAGCAGGGGTGAACTCTGTGTGGGCCCCGTGGCAGCATCCAGGCTGTGGGGTGCCTGTGACCCCCGAAGCTCCAGAGGGCATGTTACAGTGCTCTTCTGGCTCTGCCATTTGTGGACGGCTTAAGTGTTAA
Amino sequence
MSRKQNQKGRRARVNKEGTGGHECWNRLAASVPAGVNSVWAPWQHPGCGVPVTPEAPEGMLQCSSGSAICGRLKC*