ENST00000343575.11 CXCL12

Information
Transcript ID
ENST00000343575.11
Genome
hg19
Position
chr10:44,872,515-44,880,545
Strand
-
CDS length
270
Amino acid length
90
Gene symbol
CXCL12
Gene type
protein-coding
Gene description
C-X-C motif chemokine ligand 12
Gene Entrez Gene ID
6387
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
3 44,872,515 44,874,171
2 44,876,211 44,876,328
1 44,880,393 44,880,545
CDS
Exon number Type Start Stop
3 CDS 44,874,081 44,874,171
2 CDS 44,876,211 44,876,328
1 CDS 44,880,393 44,880,453
Other genome
Genome Chromosome Start End Links
hg38 chr10 44,377,067 44,385,097 Link
CDS sequence
ATGAACGCCAAGGTCGTGGTCGTGCTGGTCCTCGTGCTGACCGCGCTCTGCCTCAGCGACGGGAAGCCCGTCAGCCTGAGCTACAGATGCCCATGCCGATTCTTCGAAAGCCATGTTGCCAGAGCCAACGTCAAGCATCTCAAAATTCTCAACACTCCAAACTGTGCCCTTCAGATTGTAGCCCGGCTGAAGAACAACAACAGACAAGTGTGCATTGACCCGAAGCTAAAGTGGATTCAGGAGTACCTGGAGAAAGCTTTAAACAAGTAA
Amino sequence
MNAKVVVVLVLVLTALCLSDGKPVSLSYRCPCRFFESHVARANVKHLKILNTPNCALQIVARLKNNNRQVCIDPKLKWIQEYLEKALNK*