CXCL12 C-X-C motif chemokine ligand 12
Information
Clinical Significance
| MGeND | ClinVar | |
|---|---|---|
| Benign | 0 | 46 |
| Likely benign | 0 | 10 |
| protective | 0 | 2 |
| Uncertain significance | 0 | 22 |
Ranking
| ClinVar | |
|---|---|
 |
0 |
 |
0 |
 |
4 |
 |
72 |
 |
2 |
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
[No Data.]
Locus Zoom
Variants
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
| Type | ID |
|---|---|
| SYNONYM | IRH |
| SYNONYM | PBSF |
| SYNONYM | SCYB12 |
| SYNONYM | SDF1 |
| SYNONYM | TLSF |
| SYNONYM | TPAR1 |
| MIM | 600835 OMIM |
| HGNC | HGNC:10672 HGNC |
| Ensembl | ENSG00000107562 Ensembl |
| AllianceGenome | HGNC:10672 |
| Descrption | Source | Links |
|---|
| ID | Genome | Chromosome | Start | End | Length |
|---|---|---|---|---|---|
| ENST00000374426.6 | hg38 | chr10 | 44,375,867 | 44,385,043 | 9,177 |
| ENST00000374429.6 | hg38 | chr10 | 44,370,165 | 44,385,092 | 14,928 |
| ENST00000343575.11 | hg38 | chr10 | 44,377,067 | 44,385,097 | 8,031 |
| ENST00000395793.7 | hg38 | chr10 | 44,372,622 | 44,385,092 | 12,471 |
| ENST00000395794.2 | hg38 | chr10 | 44,377,164 | 44,385,049 | 7,886 |
| ENST00000374429.6 | hg19 | chr10 | 44,865,613 | 44,880,540 | 14,928 |
| ENST00000395793.7 | hg19 | chr10 | 44,868,070 | 44,880,540 | 12,471 |
| ENST00000374426.6 | hg19 | chr10 | 44,871,315 | 44,880,491 | 9,177 |
| ENST00000343575.11 | hg19 | chr10 | 44,872,515 | 44,880,545 | 8,031 |
| ENST00000395794.2 | hg19 | chr10 | 44,872,612 | 44,880,497 | 7,886 |
Genome browser