ENST00000253968.11 BARX1
Information
- Transcript ID
- ENST00000253968.11
- Genome
- hg19
- Position
- chr9:96,713,909-96,717,637
- Strand
- -
- CDS length
- 765
- Amino acid length
- 255
- Gene symbol
- BARX1
- Gene type
- protein-coding
- Gene description
- BARX homeobox 1
- Gene Entrez Gene ID
- 56033
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 4 | 96,713,909 | 96,714,610 |
| 3 | 96,715,011 | 96,715,095 |
| 2 | 96,715,178 | 96,715,469 |
| 1 | 96,717,206 | 96,717,637 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 4 | CDS | 96,714,446 | 96,714,610 |
| 3 | CDS | 96,715,011 | 96,715,095 |
| 2 | CDS | 96,715,178 | 96,715,469 |
| 1 | CDS | 96,717,206 | 96,717,428 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr9 | 93,951,627 | 93,955,355 | Link |
CDS sequence
ATGCAGCGGCCGGGGGAGCCGGGCGCCGCGCGCTTCGGCCCGCCCGAGGGCTGCGCGGACCACCGGCCGCACCGCTATCGCAGCTTCATGATTGAGGAGATCCTCACGGAGCCACCCGGGCCCAAGGGCGCCGCGCCCGCAGCCGCCGCTGCCGCGGCGGGCGAGCTGCTGAAGTTCGGCGTGCAGGCGCTGCTGGCGGCGCGGCCCTTCCACAGCCACCTGGCCGTGCTGAAGGCCGAGCAGGCGGCGGTGTTCAAGTTCCCACTGGCGCCGCTGGGCTGTTCAGGGCTGAGCTCTGCGTTGCTGGCGGCAGGGCCCGGGCTGCCCGGCGCCGCGGGTGCGCCACACCTGCCGCTCGAGTTGCAGCTCCGCGGGAAGCTGGAGGCGGCAGGCCCTGGGGAGCCAGGCACCAAAGCCAAGAAGGGGCGTCGGAGCCGCACTGTGTTCACCGAGCTGCAGCTGATGGGCCTGGAGAAACGCTTCGAGAAGCAGAAGTACCTTTCCACGCCGGACAGAATAGATCTTGCTGAGTCCCTGGGCCTGAGCCAGTTGCAGGTGAAGACGTGGTACCAGAATCGGAGGATGAAGTGGAAGAAAATAGTGCTGCAGGGCGGCGGCCTGGAGTCTCCCACCAAGCCCAAGGGGCGGCCCAAGAAGAACTCAATTCCAACGAGCGAGCAGCTTACTGAGCAGGAGCGCGCCAAGGATGCAGAGAAACCGGCGGAGGTGCCGGGCGAGCCCAGCGACAGGAGCCGCGAGGACTGA
Amino sequence
MQRPGEPGAARFGPPEGCADHRPHRYRSFMIEEILTEPPGPKGAAPAAAAAAAGELLKFGVQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLAAGPGLPGAAGAPHLPLELQLRGKLEAAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGLESPTKPKGRPKKNSIPTSEQLTEQERAKDAEKPAEVPGEPSDRSRED*