ENST00000253968.11 BARX1

Information
Transcript ID
ENST00000253968.11
Genome
hg38
Position
chr9:93,951,627-93,955,355
Strand
-
CDS length
765
Amino acid length
255
Gene symbol
BARX1
Gene type
protein-coding
Gene description
BARX homeobox 1
Gene Entrez Gene ID
56033
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 93,951,627 93,952,328
3 93,952,729 93,952,813
2 93,952,896 93,953,187
1 93,954,924 93,955,355
CDS
Exon number Type Start Stop
4 CDS 93,952,164 93,952,328
3 CDS 93,952,729 93,952,813
2 CDS 93,952,896 93,953,187
1 CDS 93,954,924 93,955,146
Other genome
Genome Chromosome Start End Links
hg19 chr9 96,713,909 96,717,637 Link
CDS sequence
ATGCAGCGGCCGGGGGAGCCGGGCGCCGCGCGCTTCGGCCCGCCCGAGGGCTGCGCGGACCACCGGCCGCACCGCTATCGCAGCTTCATGATTGAGGAGATCCTCACGGAGCCACCCGGGCCCAAGGGCGCCGCGCCCGCAGCCGCCGCTGCCGCGGCGGGCGAGCTGCTGAAGTTCGGCGTGCAGGCGCTGCTGGCGGCGCGGCCCTTCCACAGCCACCTGGCCGTGCTGAAGGCCGAGCAGGCGGCGGTGTTCAAGTTCCCACTGGCGCCGCTGGGCTGTTCAGGGCTGAGCTCTGCGTTGCTGGCGGCAGGGCCCGGGCTGCCCGGCGCCGCGGGTGCGCCACACCTGCCGCTCGAGTTGCAGCTCCGCGGGAAGCTGGAGGCGGCAGGCCCTGGGGAGCCAGGCACCAAAGCCAAGAAGGGGCGTCGGAGCCGCACTGTGTTCACCGAGCTGCAGCTGATGGGCCTGGAGAAACGCTTCGAGAAGCAGAAGTACCTTTCCACGCCGGACAGAATAGATCTTGCTGAGTCCCTGGGCCTGAGCCAGTTGCAGGTGAAGACGTGGTACCAGAATCGGAGGATGAAGTGGAAGAAAATAGTGCTGCAGGGCGGCGGCCTGGAGTCTCCCACCAAGCCCAAGGGGCGGCCCAAGAAGAACTCAATTCCAACGAGCGAGCAGCTTACTGAGCAGGAGCGCGCCAAGGATGCAGAGAAACCGGCGGAGGTGCCGGGCGAGCCCAGCGACAGGAGCCGCGAGGACTGA
Amino sequence
MQRPGEPGAARFGPPEGCADHRPHRYRSFMIEEILTEPPGPKGAAPAAAAAAAGELLKFGVQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLAAGPGLPGAAGAPHLPLELQLRGKLEAAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGLESPTKPKGRPKKNSIPTSEQLTEQERAKDAEKPAEVPGEPSDRSRED*