ENST00000215919.3 PATZ1

Information
Transcript ID
ENST00000215919.3
Genome
hg38
Position
chr22:31,340,677-31,345,776
Strand
-
CDS length
1,614
Amino acid length
538
Gene symbol
PATZ1
Gene type
protein-coding
Gene description
POZ/BTB and AT hook containing zinc finger 1
Gene Entrez Gene ID
23598
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
3 31,340,677 31,341,683
2 31,342,897 31,342,960
1 31,344,332 31,345,776
CDS
Exon number Type Start Stop
3 CDS 31,341,405 31,341,683
2 CDS 31,342,897 31,342,960
1 CDS 31,344,332 31,345,602
Other genome
Genome Chromosome Start End Links
hg19 chr22 31,736,663 31,741,762 Link
CDS sequence
ATGGAGCGGGTGAACGACGCTTCGTGCGGCCCGTCTGGCTGCTACACATACCAGGTGAGCAGACACAGCACGGAGATGCTGCACAACCTGAACCAGCAGCGCAAAAACGGCGGGCGCTTCTGCGACGTGCTCTTGCGGGTAGGCGACGAGAGCTTCCCAGCGCACCGCGCCGTGCTGGCCGCCTGCAGCGAGTACTTTGAGTCGGTGTTCAGCGCCCAGTTGGGCGACGGCGGAGCTGCGGACGGGGGTCCGGCTGATGTAGGGGGCGCGACGGCAGCACCAGGCGGCGGGGCCGGGGGCAGCCGGGAGCTGGAGATGCACACTATCAGCTCCAAGGTATTTGGGGACATTCTGGACTTCGCCTACACTTCCCGCATCGTGGTGCGCTTGGAGAGCTTTCCCGAACTCATGACGGCCGCCAAGTTCCTGCTGATGAGGTCGGTTATCGAGATCTGCCAGGAAGTCATCAAACAGTCCAACGTACAGATCCTGGTACCCCCTGCCCGCGCCGATATAATGCTCTTTCGCCCCCCTGGGACCTCGGACTTGGGCTTCCCTTTGGACATGACCAACGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGCAGCTCGGGCGGCTGGTGCAGCCATTGCAGGCCAAGCCTCTTTGCCTGTGTTACCTGGGGTGGACCGCTTGCCCATGGTGGCTGGACCCCTATCCCCCCAACTGCTGACTTCCCCATTCCCCAGTGTGGCATCCAGTGCCCCTCCCCTGACTGGCAAGCGAGGCCGGGGCCGCCCAAGGAAGGCCAACCTGCTGGACTCAATGTTTGGGTCCCCAGGGGGCCTGAGGGAGGCAGGCATCCTTCCATGCGGTCTATGTGGTAAGGTGTTCACTGATGCCAACCGGCTCCGGCAGCACGAGGCCCAGCACGGTGTCACCAGCCTCCAGCTGGGCTACATCGACCTTCCTCCTCCGAGGCTGGGTGAGAATGGGCTACCCATCTCTGAAGACCCCGACGGCCCCCGAAAGAGGAGCCGGACCAGGAAGCAGGTGGCTTGTGAGATCTGCGGCAAGATCTTCCGTGATGTGTATCATCTTAACCGGCACAAGCTGTCCCACTCTGGGGAGAAGCCCTACTCCTGCCCTGTGTGTGGGTTGCGGTTCAAGAGAAAAGACCGCATGTCCTACCATGTGCGGTCCCATGATGGGTCCGTGGGCAAGCCTTACATCTGCCAGAGCTGTGGGAAAGGCTTCTCCAGGCCTGATCACTTGAACGGACATATCAAGCAGGTGCACACTTCTGAGCGGCCTCACAAGTGTCAGGTGTGGGTTGGGAGCAGCAGCGGCCTGCCGCCCCTGGAACCTCTTCCTAGCGACCTGCCATCATGGGACTTTGCCCAGCCTGCTTTGTGGAGGTCGTCCCATTCGGTTCCTGACACCGCCTTTTCCCTTTCTCTAAAAAAATCATTCCCAGCCCTTGAAAACCTGGGCCCAGCACACTCCAGCAACACTCTCTTCTGCCCAGCCCCGCCGGGATATCTGAGGCAGGGCTGGACCACCCCAGAGGGCAGCAGGGCCTTTACCCAGTGGCCTGTTGGCTAG
Amino sequence
MERVNDASCGPSGCYTYQVSRHSTEMLHNLNQQRKNGGRFCDVLLRVGDESFPAHRAVLAACSEYFESVFSAQLGDGGAADGGPADVGGATAAPGGGAGGSRELEMHTISSKVFGDILDFAYTSRIVVRLESFPELMTAAKFLLMRSVIEICQEVIKQSNVQILVPPARADIMLFRPPGTSDLGFPLDMTNGAALAANSNGIAGSMQPEEEAARAAGAAIAGQASLPVLPGVDRLPMVAGPLSPQLLTSPFPSVASSAPPLTGKRGRGRPRKANLLDSMFGSPGGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSLQLGYIDLPPPRLGENGLPISEDPDGPRKRSRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVGSSSGLPPLEPLPSDLPSWDFAQPALWRSSHSVPDTAFSLSLKKSFPALENLGPAHSSNTLFCPAPPGYLRQGWTTPEGSRAFTQWPVG*