ENST00000478836.6 IFT56

Information
Transcript ID
ENST00000478836.6
Genome
hg19
Position
chr7:138,818,524-138,874,548
Strand
+
CDS length
1,344
Amino acid length
448
Gene symbol
IFT56
Gene type
protein-coding
Gene description
intraflagellar transport 56
Gene Entrez Gene ID
79989
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 138,818,524 138,818,606
2 138,819,401 138,819,538
3 138,822,593 138,822,685
4 138,824,636 138,824,750
5 138,827,002 138,827,051
6 138,845,694 138,845,768
7 138,849,878 138,849,980
8 138,851,589 138,851,641
9 138,853,090 138,853,143
10 138,854,035 138,854,098
11 138,862,960 138,863,048
12 138,863,261 138,863,344
13 138,864,320 138,864,389
14 138,865,838 138,865,944
15 138,872,152 138,872,285
16 138,874,067 138,874,548
CDS
Exon number Type Start Stop
1 CDS 138,818,604 138,818,606
2 CDS 138,819,401 138,819,538
3 CDS 138,822,593 138,822,685
4 CDS 138,824,636 138,824,750
5 CDS 138,827,002 138,827,051
6 CDS 138,845,694 138,845,768
7 CDS 138,849,878 138,849,980
8 CDS 138,851,589 138,851,641
9 CDS 138,853,090 138,853,143
10 CDS 138,854,035 138,854,098
11 CDS 138,862,960 138,863,048
12 CDS 138,863,261 138,863,344
13 CDS 138,864,320 138,864,389
14 CDS 138,865,838 138,865,944
15 CDS 138,872,152 138,872,285
16 CDS 138,874,067 138,874,178
Other genome
Genome Chromosome Start End Links
hg38 chr7 139,133,778 139,189,802 Link
CDS sequence
ATGATGCTTTCAAGGGCCAAACCTGCTGTAGGCAGAGGCGTACAGCACACTGACAAAAGAAAGAAGAAAGGTAGGAAGATTCCAAAACTAGAGGAGCTACTTTCAAAAAGAGATTTCACTGGAGCTATTACCCTGTTGGAGTTCAAACGTCATGTTGGGGAAGAAGAAGAGGATACTAATTTGTGGATTGGATATTGTGCCTTTCACCTGGGTGACTACAAGAGAGCTCTGGAGGAATACGAAAATGCTACAAAAGAGGAAAATTGTAATTCTGAAGTCTGGGTGAACCTAGCTTGCACCTACTTCTTTCTTGGGATGTATAAACAAGCTGAAGCAGCTGGATTTAAAGCTTCAAAAAGCCGACTCCAAAACCGCCTCCTCTTCCACTTGGCTCACAAGGCAGAACTCAAAAGCTTGATGGACAATGCTTCTTCATCCTTTGAATTTGCTAAAGAACTCATCAGGCACAATCTGGTTGTTTTCCGAGGAGGTGAAGGGGCTTTGCAGGTTTTACCTCCCCTAGTTGATGTCATTCCTGAAGCTAGGCTAAACTTGGTGATTTACTACCTTCGTCAAGATGTACAAGAAGCTTATAACTTAATTAAGGATCTGGAACCTACTACTCCTCAGGAGTATATTCTCAAAGGAGTGGTCAATGCAGCCCTTGGCCAGGAAATGGGTTCAAGGGATCATATGAAAATTGCCCAGCAGTTCTTCCAGTTGGTGGGAGGATCAGCTAGTGAATGTGATACAATACCAGGGAGGCAGTGCATGGCTTCCTGTTTCTTCCTGCTTAAGCAATTTGATGATGTTTTGATTTACCTCAACTCATTTAAGAGTTACTTCTATAATGATGACATCTTTAACTTTAATTATGCCCAAGCCAAAGCTGCAACAGGCAATACCAGTGAGGGCGAAGAGGCGTTCCTCTTGATCCAAAGTGAGAAGATGAAAAATGATTACATTTACCTCAGCTGGTTAGCTCGGTGCTATATTATGAATAAGAAACCAAGACTAGCCTGGGAACTTTATCTTAAGATGGAAACCTCCGGCGAGTCCTTCAGTCTCTTACAGCTCATTGCTAATGACTGCTACAAGATGGGCCAGTTTTACTATTCTGCCAAAGCTTTTGATGTCCTTGAGAGGCTGGATCCTAACCCTGAATATTGGGAAGGCAAACGGGGTGCCTGTGTGGGCATTTTCCAGATGATCATAGCTGGGAGAGAACCCAAAGAGACCCTTCGAGAAGTGCTCCATTTACTGAGAAGCACAGGTAACACCCAAGTAGAATACATGATCCGGATCATGAAGAAATGGGCCAAAGAAAACAGAGTGTCCATCTAA
Amino sequence
MMLSRAKPAVGRGVQHTDKRKKKGRKIPKLEELLSKRDFTGAITLLEFKRHVGEEEEDTNLWIGYCAFHLGDYKRALEEYENATKEENCNSEVWVNLACTYFFLGMYKQAEAAGFKASKSRLQNRLLFHLAHKAELKSLMDNASSSFEFAKELIRHNLVVFRGGEGALQVLPPLVDVIPEARLNLVIYYLRQDVQEAYNLIKDLEPTTPQEYILKGVVNAALGQEMGSRDHMKIAQQFFQLVGGSASECDTIPGRQCMASCFFLLKQFDDVLIYLNSFKSYFYNDDIFNFNYAQAKAATGNTSEGEEAFLLIQSEKMKNDYIYLSWLARCYIMNKKPRLAWELYLKMETSGESFSLLQLIANDCYKMGQFYYSAKAFDVLERLDPNPEYWEGKRGACVGIFQMIIAGREPKETLREVLHLLRSTGNTQVEYMIRIMKKWAKENRVSI*