ENST00000454227.5 VOPP1

Information
Transcript ID
ENST00000454227.5
Genome
hg19
Position
chr7:55,540,402-55,621,580
Strand
-
CDS length
330
Amino acid length
110
Gene symbol
VOPP1
Gene type
protein-coding
Gene description
VOPP1 WW domain binding protein
Gene Entrez Gene ID
81552
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 55,540,402 55,540,738
3 55,559,975 55,560,111
2 55,588,765 55,588,823
1 55,621,504 55,621,580
CDS
Exon number Type Start Stop
4 CDS 55,540,548 55,540,738
3 CDS 55,559,975 55,560,111
2 CDS 55,588,765 55,588,766
Other genome
Genome Chromosome Start End Links
hg38 chr7 55,472,709 55,553,887 Link
CDS sequence
ATGTTCCTTCTGATGATGGGCGTGCTTTTCTGCTGCGGAGCCGGCTTCTTCATCCGGAGGCGCATGTACCCCCCGCCGCTGATCGAGGAGCCAGCCTTCAATGTGTCCTACACCAGGCAGCCCCCAAATCCCGGCCCAGGAGCCCAGCAGCCGGGGCCGCCCTATTACACCGACCCAGGAGGACCGGGGATGAACCCTGTCGGGAATTCCATGGCAATGGCTTTCCAGGTCCCACCCAACTCACCCCAGGGGAGTGTGGCCTGCCCGCCCCCTCCAGCCTACTGCAACACGCCTCCGCCCCCGTACGAACAGGTAGTGAAGGCCAAGTAG
Amino sequence
MFLLMMGVLFCCGAGFFIRRRMYPPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPPYEQVVKAK*