ENST00000427700.1 VOPP1

Information
Transcript ID
ENST00000427700.1
Genome
hg19
Position
chr7:55,540,470-55,639,980
Strand
-
CDS length
513
Amino acid length
171
Gene symbol
VOPP1
Gene type
protein-coding
Gene description
VOPP1 WW domain binding protein
Gene Entrez Gene ID
81552
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
6 55,540,470 55,540,738
5 55,559,975 55,560,111
4 55,565,306 55,565,383
3 55,588,765 55,588,823
2 55,629,673 55,629,744
1 55,639,964 55,639,980
CDS
Exon number Type Start Stop
6 CDS 55,540,548 55,540,738
5 CDS 55,559,975 55,560,111
4 CDS 55,565,306 55,565,383
3 CDS 55,588,765 55,588,823
2 CDS 55,629,673 55,629,720
Other genome
Genome Chromosome Start End Links
hg38 chr7 55,472,777 55,572,287 Link
CDS sequence
ATGAGGATCAGAAGTCTTCATCCAGTACAGCAGACTGAACCGACTACTTGCACAGAAGCCAAAAAGCATTGCTGGTATTTCGAAGGACTCTATCCAACCTATTATATATGCCGCTCCTACGAGGACTGCTGTGGCTCCAGGTGCTGTGTGCGGGCCCTCTCCATACAGAGGCTGTGGTACTTCTGGTTCCTTCTGATGATGGGCGTGCTTTTCTGCTGCGGAGCCGGCTTCTTCATCCGGAGGCGCATGTACCCCCCGCCGCTGATCGAGGAGCCAGCCTTCAATGTGTCCTACACCAGGCAGCCCCCAAATCCCGGCCCAGGAGCCCAGCAGCCGGGGCCGCCCTATTACACCGACCCAGGAGGACCGGGGATGAACCCTGTCGGGAATTCCATGGCAATGGCTTTCCAGGTCCCACCCAACTCACCCCAGGGGAGTGTGGCCTGCCCGCCCCCTCCAGCCTACTGCAACACGCCTCCGCCCCCGTACGAACAGGTAGTGAAGGCCAAGTAG
Amino sequence
MRIRSLHPVQQTEPTTCTEAKKHCWYFEGLYPTYYICRSYEDCCGSRCCVRALSIQRLWYFWFLLMMGVLFCCGAGFFIRRRMYPPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPPYEQVVKAK*