ENST00000418904.5 VOPP1
Information
- Transcript ID
- ENST00000418904.5
- Genome
- hg19
- Position
- chr7:55,539,896-55,620,545
- Strand
- -
- CDS length
- 468
- Amino acid length
- 156
- Gene symbol
- VOPP1
- Gene type
- protein-coding
- Gene description
- VOPP1 WW domain binding protein
- Gene Entrez Gene ID
- 81552
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 5 | 55,539,896 | 55,540,738 |
| 4 | 55,559,975 | 55,560,111 |
| 3 | 55,565,306 | 55,565,383 |
| 2 | 55,588,765 | 55,588,823 |
| 1 | 55,620,346 | 55,620,545 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 55,540,548 | 55,540,738 |
| 4 | CDS | 55,559,975 | 55,560,111 |
| 3 | CDS | 55,565,306 | 55,565,383 |
| 2 | CDS | 55,588,765 | 55,588,823 |
| 1 | CDS | 55,620,346 | 55,620,348 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr7 | 55,472,203 | 55,552,852 | Link |
CDS sequence
ATGTGCACAGAAGCCAAAAAGCATTGCTGGTATTTCGAAGGACTCTATCCAACCTATTATATATGCCGCTCCTACGAGGACTGCTGTGGCTCCAGGTGCTGTGTGCGGGCCCTCTCCATACAGAGGCTGTGGTACTTCTGGTTCCTTCTGATGATGGGCGTGCTTTTCTGCTGCGGAGCCGGCTTCTTCATCCGGAGGCGCATGTACCCCCCGCCGCTGATCGAGGAGCCAGCCTTCAATGTGTCCTACACCAGGCAGCCCCCAAATCCCGGCCCAGGAGCCCAGCAGCCGGGGCCGCCCTATTACACCGACCCAGGAGGACCGGGGATGAACCCTGTCGGGAATTCCATGGCAATGGCTTTCCAGGTCCCACCCAACTCACCCCAGGGGAGTGTGGCCTGCCCGCCCCCTCCAGCCTACTGCAACACGCCTCCGCCCCCGTACGAACAGGTAGTGAAGGCCAAGTAG
Amino sequence
MCTEAKKHCWYFEGLYPTYYICRSYEDCCGSRCCVRALSIQRLWYFWFLLMMGVLFCCGAGFFIRRRMYPPPLIEEPAFNVSYTRQPPNPGPGAQQPGPPYYTDPGGPGMNPVGNSMAMAFQVPPNSPQGSVACPPPPAYCNTPPPPYEQVVKAK*