ENST00000258704.3 SPDYE1
Information
- Transcript ID
- ENST00000258704.3
- Genome
- hg19
- Position
- chr7:44,040,488-44,049,721
- Strand
- +
- CDS length
- 1,011
- Amino acid length
- 337
- Gene symbol
- SPDYE1
- Gene type
- protein-coding
- Gene description
- speedy/RINGO cell cycle regulator family member E1
- Gene Entrez Gene ID
- 285955
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 44,040,488 | 44,040,883 |
| 2 | 44,042,189 | 44,042,416 |
| 3 | 44,043,452 | 44,043,510 |
| 4 | 44,044,741 | 44,044,826 |
| 5 | 44,046,867 | 44,047,185 |
| 6 | 44,047,308 | 44,047,412 |
| 7 | 44,048,266 | 44,049,721 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 44,040,625 | 44,040,883 |
| 2 | CDS | 44,042,189 | 44,042,416 |
| 3 | CDS | 44,043,452 | 44,043,510 |
| 4 | CDS | 44,044,741 | 44,044,826 |
| 5 | CDS | 44,046,867 | 44,047,185 |
| 6 | CDS | 44,047,308 | 44,047,367 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr7 | 44,000,889 | 44,010,122 | Link |
CDS sequence
ATGCAGAAGCATTACACAGTGGCCTGGTTTCTTTACTCAGCCCCTGGGGTAGATCCCAGCCCCCCATGTAGGTCCCTTGGCTGGAAAAGGAAGAGGGAGTGGTCAGATGAATCTGAGGAGGAGCCGGAGAAGGAGCTCGCCCCTGAGCCTGAGGAGACCTGGGTAGTGGAGACGCTGTGTGGGCTCAAGATGAAGCTGAAGCAACAGCGAGTGTCACCCATCCTCCTTGAGCACCACAAGGACTTCAACAGTCAGCTTGCCCCTGGGGTAGATCCCAGCCCCCCGCATAGGTCCTTTTGCTGGAAAAGGAAGATGGAGTGGTGGGACAAATCTGAGGAGTCGGAGGAGGAGCCACGGAAGGTGCTCGCCCCTGAGCCTGAGGAGATCTGGGTGGCGGAGATGCTGTGTGGCCTCAAGATGAAGCTGAAGCGACGGCGAGTGTCGCTCGTGCTCCCTGAGCACCACGAGGCCTTCAACAGGCTGCTTGAGGATCCTGTCATTAAAAGATTCCTGGCCTGGGACAAAGATCTGAGGGTGTCGGACAAGTATCTCCTTGCTATGGTCATAGCGTATTTCAGCCGAGCCGGCTTCCCCTCCTGGCAATACCAACGCCTTCATTTCTTCCTGGCTCTCTACCTGGCCAATGACATGGAGGAGGACGACGAGGACTCCAAACAAAACATCTTCCACTTCCTGTATGGGAAGAACCGCTCTCGCATACCCTTGCTCCGTAAGCGTCGGTTCCAGTTATACCGTTCCATGAACCCGAGGGCCAGGAAGAACCGCTCTCACATACCCTTGGTCCGTAAGCGTCGGTTCCAGTTACGCCGTTGCATGAACCCGAGGGCCAGGAAGAACCGCTCTCAGATAGTCCTGTTCCAGAAACGTCGGTTCCACTTCTTCTGTTCCATGAGCTGCAGGGCTTGGGTTTCCCCAGAGGAGTTGGAGGAGATCCAGGCTTATGACCCAGAGCACTGGGTGTGGGCGCGAGATCGCGCTCGCCTTTCCTAG
Amino sequence
MQKHYTVAWFLYSAPGVDPSPPCRSLGWKRKREWSDESEEEPEKELAPEPEETWVVETLCGLKMKLKQQRVSPILLEHHKDFNSQLAPGVDPSPPHRSFCWKRKMEWWDKSEESEEEPRKVLAPEPEEIWVAEMLCGLKMKLKRRRVSLVLPEHHEAFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRAGFPSWQYQRLHFFLALYLANDMEEDDEDSKQNIFHFLYGKNRSRIPLLRKRRFQLYRSMNPRARKNRSHIPLVRKRRFQLRRCMNPRARKNRSQIVLFQKRRFHFFCSMSCRAWVSPEELEEIQAYDPEHWVWARDRARLS*