ENST00000258704.3 SPDYE1
Information
- Transcript ID
- ENST00000258704.3
- Genome
- hg38
- Position
- chr7:44,000,889-44,010,122
- Strand
- +
- CDS length
- 1,011
- Amino acid length
- 337
- Gene symbol
- SPDYE1
- Gene type
- protein-coding
- Gene description
- speedy/RINGO cell cycle regulator family member E1
- Gene Entrez Gene ID
- 285955
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 44,000,889 | 44,001,284 |
| 2 | 44,002,590 | 44,002,817 |
| 3 | 44,003,853 | 44,003,911 |
| 4 | 44,005,142 | 44,005,227 |
| 5 | 44,007,268 | 44,007,586 |
| 6 | 44,007,709 | 44,007,813 |
| 7 | 44,008,667 | 44,010,122 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 44,001,026 | 44,001,284 |
| 2 | CDS | 44,002,590 | 44,002,817 |
| 3 | CDS | 44,003,853 | 44,003,911 |
| 4 | CDS | 44,005,142 | 44,005,227 |
| 5 | CDS | 44,007,268 | 44,007,586 |
| 6 | CDS | 44,007,709 | 44,007,768 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr7 | 44,040,488 | 44,049,721 | Link |
CDS sequence
ATGCAGAAGCATTACACAGTGGCCTGGTTTCTTTACTCAGCCCCTGGGGTAGATCCCAGCCCCCCATGTAGGTCCCTTGGCTGGAAAAGGAAGAGGGAGTGGTCAGATGAATCTGAGGAGGAGCCGGAGAAGGAGCTCGCCCCTGAGCCTGAGGAGACCTGGGTAGTGGAGACGCTGTGTGGGCTCAAGATGAAGCTGAAGCAACAGCGAGTGTCACCCATCCTCCTTGAGCACCACAAGGACTTCAACAGTCAGCTTGCCCCTGGGGTAGATCCCAGCCCCCCGCATAGGTCCTTTTGCTGGAAAAGGAAGATGGAGTGGTGGGACAAATCTGAGGAGTCGGAGGAGGAGCCACGGAAGGTGCTCGCCCCTGAGCCTGAGGAGATCTGGGTGGCGGAGATGCTGTGTGGCCTCAAGATGAAGCTGAAGCGACGGCGAGTGTCGCTCGTGCTCCCTGAGCACCACGAGGCCTTCAACAGGCTGCTTGAGGATCCTGTCATTAAAAGATTCCTGGCCTGGGACAAAGATCTGAGGGTGTCGGACAAGTATCTCCTTGCTATGGTCATAGCGTATTTCAGCCGAGCCGGCTTCCCCTCCTGGCAATACCAACGCCTTCATTTCTTCCTGGCTCTCTACCTGGCCAATGACATGGAGGAGGACGACGAGGACTCCAAACAAAACATCTTCCACTTCCTGTATGGGAAGAACCGCTCTCGCATACCCTTGCTCCGTAAGCGTCGGTTCCAGTTATACCGTTCCATGAACCCGAGGGCCAGGAAGAACCGCTCTCACATACCCTTGGTCCGTAAGCGTCGGTTCCAGTTACGCCGTTGCATGAACCCGAGGGCCAGGAAGAACCGCTCTCAGATAGTCCTGTTCCAGAAACGTCGGTTCCACTTCTTCTGTTCCATGAGCTGCAGGGCTTGGGTTTCCCCAGAGGAGTTGGAGGAGATCCAGGCTTATGACCCAGAGCACTGGGTGTGGGCGCGAGATCGCGCTCGCCTTTCCTAG
Amino sequence
MQKHYTVAWFLYSAPGVDPSPPCRSLGWKRKREWSDESEEEPEKELAPEPEETWVVETLCGLKMKLKQQRVSPILLEHHKDFNSQLAPGVDPSPPHRSFCWKRKMEWWDKSEESEEEPRKVLAPEPEEIWVAEMLCGLKMKLKRRRVSLVLPEHHEAFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRAGFPSWQYQRLHFFLALYLANDMEEDDEDSKQNIFHFLYGKNRSRIPLLRKRRFQLYRSMNPRARKNRSHIPLVRKRRFQLRRCMNPRARKNRSQIVLFQKRRFHFFCSMSCRAWVSPEELEEIQAYDPEHWVWARDRARLS*