ENST00000649031.1 HOXA13

Information
Transcript ID
ENST00000649031.1
Genome
hg19
Position
chr7:27,233,983-27,239,710
Strand
-
CDS length
1,167
Amino acid length
389
Gene symbol
HOXA13
Gene type
protein-coding
Gene description
homeobox A13
Gene Entrez Gene ID
3209
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
2 27,233,983 27,238,061
1 27,238,775 27,239,710
CDS
Exon number Type Start Stop
2 CDS 27,237,817 27,238,061
1 CDS 27,238,775 27,239,696
Other genome
Genome Chromosome Start End Links
hg38 chr7 27,194,364 27,200,091 Link
CDS sequence
ATGACAGCCTCCGTGCTCCTCCACCCCCGCTGGATCGAGCCCACCGTCATGTTTCTCTACGACAACGGCGGCGGCCTGGTGGCCGACGAGCTCAACAAGAACATGGAAGGGGCGGCGGCGGCTGCAGCAGCGGCTGCAGCGGCGGCGGCTGCCGGGGCCGGGGGCGGGGGCTTCCCCCACCCGGCGGCTGCGGCGGCAGGGGGCAACTTCTCGGTGGCGGCGGCGGCCGCGGCTGCGGCGGCGGCCGCGGCCAACCAGTGCCGCAACCTGATGGCGCACCCGGCGCCCTTGGCGCCAGGAGCCGCGTCCGCCTACAGCAGCGCCCCCGGGGAGGCGCCCCCGTCGGCTGCCGCCGCTGCTGCCGCGGCTGCCGCTGCAGCCGCCGCCGCCGCCGCCGCGTCGTCCTCGGGAGGTCCCGGCCCGGCGGGCCCGGCGGGCGCAGAGGCCGCCAAGCAATGCAGCCCCTGCTCGGCAGCGGCGCAGAGCTCGTCGGGGCCCGCGGCGCTGCCCTATGGCTACTTCGGCAGCGGCTACTACCCGTGCGCCCGCATGGGCCCGCACCCCAACGCCATCAAGTCGTGCGCGCAGCCCGCCTCGGCCGCCGCCGCCGCCGCCTTCGCGGACAAGTACATGGATACCGCCGGCCCAGCTGCCGAGGAGTTCAGCTCCCGCGCTAAGGAGTTCGCCTTCTACCACCAGGGCTACGCAGCCGGGCCTTACCACCACCATCAGCCCATGCCTGGCTACCTGGATATGCCAGTGGTGCCGGGCCTCGGGGGCCCCGGCGAGTCGCGCCACGAACCCTTGGGTCTTCCCATGGAAAGCTACCAGCCCTGGGCGCTGCCCAACGGCTGGAACGGCCAAATGTACTGCCCCAAAGAGCAGGCGCAGCCTCCCCACCTCTGGAAGTCCACTCTGCCCGACGTGGTCTCCCATCCCTCGGATGCCAGCTCCTATAGGAGGGGGAGAAAGAAGCGCGTGCCTTATACCAAGGTGCAATTAAAAGAACTTGAACGGGAATACGCCACGAATAAATTCATTACTAAGGACAAACGGAGGCGGATATCAGCCACGACGAATCTCTCTGAGCGGCAGGTCACAATCTGGTTCCAGAACAGGAGGGTTAAAGAGAAAAAAGTCATCAACAAACTGAAAACCACTAGTTAA
Amino sequence
MTASVLLHPRWIEPTVMFLYDNGGGLVADELNKNMEGAAAAAAAAAAAAAAGAGGGGFPHPAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAHPAPLAPGAASAYSSAPGEAPPSAAAAAAAAAAAAAAAAAASSSGGPGPAGPAGAEAAKQCSPCSAAAQSSSGPAALPYGYFGSGYYPCARMGPHPNAIKSCAQPASAAAAAAFADKYMDTAGPAAEEFSSRAKEFAFYHQGYAAGPYHHHQPMPGYLDMPVVPGLGGPGESRHEPLGLPMESYQPWALPNGWNGQMYCPKEQAQPPHLWKSTLPDVVSHPSDASSYRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQVTIWFQNRRVKEKKVINKLKTTS*