ENST00000399004.7 GIN1

Information
Transcript ID
ENST00000399004.7
Genome
hg19
Position
chr5:102,421,704-102,455,842
Strand
-
CDS length
1,569
Amino acid length
523
Gene symbol
GIN1
Gene type
protein-coding
Gene description
gypsy retrotransposon integrase 1
Gene Entrez Gene ID
54826
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
8 102,421,704 102,423,876
7 102,432,245 102,432,530
6 102,433,018 102,433,194
5 102,433,294 102,433,485
4 102,440,245 102,440,550
3 102,442,420 102,442,613
2 102,444,273 102,444,418
1 102,455,768 102,455,842
CDS
Exon number Type Start Stop
8 CDS 102,423,602 102,423,876
7 CDS 102,432,245 102,432,530
6 CDS 102,433,018 102,433,194
5 CDS 102,433,294 102,433,485
4 CDS 102,440,245 102,440,550
3 CDS 102,442,420 102,442,613
2 CDS 102,444,273 102,444,411
Other genome
Genome Chromosome Start End Links
hg38 chr5 103,086,000 103,120,138 Link
CDS sequence
ATGGTCCGTAGTGGAAAAAATGGTGACCTTCATCTTAAACAGATTGCATATTACAAACGAACTGGTGAATATCATTCAACTACACTGCCAAGTGAGAGAAGTGGCATAAGAAGAGCAGCAAAAAAATTTGTCTTCAAAGAAAAAAAGCTGTTTTATGTTGGAAAAGACAGAAAACAAAATCGTTTGGTAATTGTTTCAGAAGAGGAAAAAAAGAAAGTCTTAAGAGAATGCCATGAAAATGACAGTGGAGCTCATCATGGTATATCCAGGACCCTCACTCTGGTAGAATCCAATTATTATTGGACATCTGTGACCAATGATGTCAAACAGTGGGTATATGCTTGTCAGCATTGCCAAGTGGCAAAAAATACAGTTATTGTAGCACCGAAACAGCACCTTCTCAAGGTGGAAAATCCATGGAGTTTAGTTACTGTTGATCTGATGGGGCCTTTTCATACAAGCAACAGAAGTCATGTATATGCTATAATCATGACAGATTTGTTCACCAAATGGATTGTGATTTTGCCTCTATGTGATGTTTCAGCATCAGAAGTTTCTAAAGCTATTATCAATATATTTTTCTTATATGGACCTCCTCAGAAAATAATAATGGACCAAAGAGATGAATTCATTCAACAGATCAATATTGAACTGTACAGATTGTTTGGCATAAAGCAAATTGTAATTTCTCACACCTCTGGAACTGTTAACCCAACGGAAAGTACACCTAACACAATCAAAGCATTTCTCTCCAAACACTGTGCTGACCACCCAAACAATTGGGATGATCACCTATCAGCTGTTTCATTTGCCTTCAATGTAACTCACTTGGAACCTACTAAAAATACACCATATTTTCAAATGTTTAGTCGAAATCCTTATATGCCTGAGACTTCAGATAGTCTTCATGAAGTGGATGGTGATAATACAAGTATGTTTGCCAAAATTCTAGATGCAATTAAAGAAGCTGATAAAATAATGGAGAATAAGACAACTTCACTGGGCCAGATGGAGAACAACAATTTGGATGAACTAAATAAAAGCAAGATCATTGTTAAAAAGAAACCCAAACAATTAAATCCATTTCATTTAAAAGTGGGTCATGAAGTTTTAAGACAAAGGAAAAATTGGTGGAAGGATGGTCGTTTTCAGTCTGAATGGGTTGGTCCTTGTGTCATAGACTATATTACAGAAAGTGGATGTGCTGTCCTGAGAGACAACACTGGGGTTAGACTGAAAAGACCTATCAAAATGTCCCACCTTAAGCCCTACATAAGAGAATCCAGTGAACAAGAAAGTCTTTATCTCTTGCAAGGTTCAGTAGTGGCAGATCATGACTACATTGGATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATTCTGGTGGAAGATGCAACTATTGGTATAGTCGATAATGAATTACTGACATCAAGCAAGGATCGTGAACTATTAGAATATAGAAATACGAAAATCTCTCCATTGATAGACGATCATAGTTCTCTTGAAAAGCAGACTTTCAGTCTGTTGGACTCTTCAAACCAGGTTCTTGAATACTTAAGTTAG
Amino sequence
MVRSGKNGDLHLKQIAYYKRTGEYHSTTLPSERSGIRRAAKKFVFKEKKLFYVGKDRKQNRLVIVSEEEKKKVLRECHENDSGAHHGISRTLTLVESNYYWTSVTNDVKQWVYACQHCQVAKNTVIVAPKQHLLKVENPWSLVTVDLMGPFHTSNRSHVYAIIMTDLFTKWIVILPLCDVSASEVSKAIINIFFLYGPPQKIIMDQRDEFIQQINIELYRLFGIKQIVISHTSGTVNPTESTPNTIKAFLSKHCADHPNNWDDHLSAVSFAFNVTHLEPTKNTPYFQMFSRNPYMPETSDSLHEVDGDNTSMFAKILDAIKEADKIMENKTTSLGQMENNNLDELNKSKIIVKKKPKQLNPFHLKVGHEVLRQRKNWWKDGRFQSEWVGPCVIDYITESGCAVLRDNTGVRLKRPIKMSHLKPYIRESSEQESLYLLQGSVVADHDYIGLPEIPIGAYQANILVEDATIGIVDNELLTSSKDRELLEYRNTKISPLIDDHSSLEKQTFSLLDSSNQVLEYLS*