ENST00000399004.7 GIN1

Information
Transcript ID
ENST00000399004.7
Genome
hg38
Position
chr5:103,086,000-103,120,138
Strand
-
CDS length
1,569
Amino acid length
523
Gene symbol
GIN1
Gene type
protein-coding
Gene description
gypsy retrotransposon integrase 1
Gene Entrez Gene ID
54826
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
8 103,086,000 103,088,172
7 103,096,541 103,096,826
6 103,097,314 103,097,490
5 103,097,590 103,097,781
4 103,104,541 103,104,846
3 103,106,716 103,106,909
2 103,108,569 103,108,714
1 103,120,064 103,120,138
CDS
Exon number Type Start Stop
8 CDS 103,087,898 103,088,172
7 CDS 103,096,541 103,096,826
6 CDS 103,097,314 103,097,490
5 CDS 103,097,590 103,097,781
4 CDS 103,104,541 103,104,846
3 CDS 103,106,716 103,106,909
2 CDS 103,108,569 103,108,707
Other genome
Genome Chromosome Start End Links
hg19 chr5 102,421,704 102,455,842 Link
CDS sequence
ATGGTCCGTAGTGGAAAAAATGGTGACCTTCATCTTAAACAGATTGCATATTACAAACGAACTGGTGAATATCATTCAACTACACTGCCAAGTGAGAGAAGTGGCATAAGAAGAGCAGCAAAAAAATTTGTCTTCAAAGAAAAAAAGCTGTTTTATGTTGGAAAAGACAGAAAACAAAATCGTTTGGTAATTGTTTCAGAAGAGGAAAAAAAGAAAGTCTTAAGAGAATGCCATGAAAATGACAGTGGAGCTCATCATGGTATATCCAGGACCCTCACTCTGGTAGAATCCAATTATTATTGGACATCTGTGACCAATGATGTCAAACAGTGGGTATATGCTTGTCAGCATTGCCAAGTGGCAAAAAATACAGTTATTGTAGCACCGAAACAGCACCTTCTCAAGGTGGAAAATCCATGGAGTTTAGTTACTGTTGATCTGATGGGGCCTTTTCATACAAGCAACAGAAGTCATGTATATGCTATAATCATGACAGATTTGTTCACCAAATGGATTGTGATTTTGCCTCTATGTGATGTTTCAGCATCAGAAGTTTCTAAAGCTATTATCAATATATTTTTCTTATATGGACCTCCTCAGAAAATAATAATGGACCAAAGAGATGAATTCATTCAACAGATCAATATTGAACTGTACAGATTGTTTGGCATAAAGCAAATTGTAATTTCTCACACCTCTGGAACTGTTAACCCAACGGAAAGTACACCTAACACAATCAAAGCATTTCTCTCCAAACACTGTGCTGACCACCCAAACAATTGGGATGATCACCTATCAGCTGTTTCATTTGCCTTCAATGTAACTCACTTGGAACCTACTAAAAATACACCATATTTTCAAATGTTTAGTCGAAATCCTTATATGCCTGAGACTTCAGATAGTCTTCATGAAGTGGATGGTGATAATACAAGTATGTTTGCCAAAATTCTAGATGCAATTAAAGAAGCTGATAAAATAATGGAGAATAAGACAACTTCACTGGGCCAGATGGAGAACAACAATTTGGATGAACTAAATAAAAGCAAGATCATTGTTAAAAAGAAACCCAAACAATTAAATCCATTTCATTTAAAAGTGGGTCATGAAGTTTTAAGACAAAGGAAAAATTGGTGGAAGGATGGTCGTTTTCAGTCTGAATGGGTTGGTCCTTGTGTCATAGACTATATTACAGAAAGTGGATGTGCTGTCCTGAGAGACAACACTGGGGTTAGACTGAAAAGACCTATCAAAATGTCCCACCTTAAGCCCTACATAAGAGAATCCAGTGAACAAGAAAGTCTTTATCTCTTGCAAGGTTCAGTAGTGGCAGATCATGACTACATTGGATTGCCTGAAATTCCGATTGGAGCATATCAAGCAAATATTCTGGTGGAAGATGCAACTATTGGTATAGTCGATAATGAATTACTGACATCAAGCAAGGATCGTGAACTATTAGAATATAGAAATACGAAAATCTCTCCATTGATAGACGATCATAGTTCTCTTGAAAAGCAGACTTTCAGTCTGTTGGACTCTTCAAACCAGGTTCTTGAATACTTAAGTTAG
Amino sequence
MVRSGKNGDLHLKQIAYYKRTGEYHSTTLPSERSGIRRAAKKFVFKEKKLFYVGKDRKQNRLVIVSEEEKKKVLRECHENDSGAHHGISRTLTLVESNYYWTSVTNDVKQWVYACQHCQVAKNTVIVAPKQHLLKVENPWSLVTVDLMGPFHTSNRSHVYAIIMTDLFTKWIVILPLCDVSASEVSKAIINIFFLYGPPQKIIMDQRDEFIQQINIELYRLFGIKQIVISHTSGTVNPTESTPNTIKAFLSKHCADHPNNWDDHLSAVSFAFNVTHLEPTKNTPYFQMFSRNPYMPETSDSLHEVDGDNTSMFAKILDAIKEADKIMENKTTSLGQMENNNLDELNKSKIIVKKKPKQLNPFHLKVGHEVLRQRKNWWKDGRFQSEWVGPCVIDYITESGCAVLRDNTGVRLKRPIKMSHLKPYIRESSEQESLYLLQGSVVADHDYIGLPEIPIGAYQANILVEDATIGIVDNELLTSSKDRELLEYRNTKISPLIDDHSSLEKQTFSLLDSSNQVLEYLS*