ENST00000640669.1 LIMS3-LOC440895

Information
Transcript ID
ENST00000640669.1
Genome
hg19
Position
chr2:110,656,009-110,726,134
Strand
+
CDS length
747
Amino acid length
249
Gene symbol
LIMS3-LOC440895
Gene type
ncRNA
Gene description
LIMS3-LOC440895 readthrough
Gene Entrez Gene ID
100271835
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 110,656,009 110,656,487
2 110,660,830 110,660,989
3 110,671,988 110,672,054
4 110,673,529 110,673,649
5 110,674,084 110,674,233
6 110,677,066 110,677,220
7 110,677,831 110,677,923
8 110,679,217 110,679,265
9 110,681,925 110,682,000
10 110,690,665 110,690,782
11 110,692,389 110,692,471
12 110,693,755 110,693,915
13 110,694,296 110,694,520
14 110,695,552 110,695,649
15 110,704,941 110,705,422
16 110,721,046 110,721,127
17 110,722,265 110,722,379
18 110,725,647 110,726,134
CDS
Exon number Type Start Stop
1 CDS 110,656,306 110,656,487
2 CDS 110,660,830 110,660,989
3 CDS 110,671,988 110,672,054
4 CDS 110,673,529 110,673,649
5 CDS 110,674,084 110,674,233
6 CDS 110,677,066 110,677,132
Other genome
Genome Chromosome Start End Links
hg38 chr2 109,898,432 109,968,557 Link
CDS sequence
ATGGCCTTCTCAGGCCGAGCGCGCCCCTGCATTATCCCAGAGAACGAAGAAATCCCCCGAGCAGCCCTTAACACTGTCCACGAGGCCAATGGGACCGAGGACGAGAGGGCTGTTTCCAAACTGCAGCGCAGGCACAGTGACGTGAAAGTCTACAAGGAGTTCTGTGACTTTTATGCGAAATTCAACATGGCCAACGCCCTGGCCAGCGCCACTTGCGAGCGCTGCAAGGGCGGCTTTGCGCCCGCTGAGACGATCGTGAACAGTAATGGGGAGCTGTACCATGAGCAGTGTTTCGTGTGCGCTCAGTGCTTCCAGCAGTTCCCAGAAGGACTCTTCTATGAGTTTGAAGGAAGAAAGTACTGTGAACATGACTTTCAGATGCTCTTTGCCCCTTGCTGTCATCAGTGTGGTGAATTCATCATTGGCCGAGTTATCAAAGCCATGAATAACAGCTGGCATCCGGAGTGCTTCCGCTGTGACCTCTGCCAGGAAGTTCTGGCAGATATCGGGTTTGTCAAGAATGCTGGGAGACACCTGTGTCGCCCCTGTCATAATCGTGAGAAAGCCAGAGGCCTTGGGAAATACATCTGCCAGAAATGCCATGCTATCATCGATGAGCAGCCTCTGATATTCAAGAACGACCCCTACCATCCAGACCATTTCAACTGCGCCAACTGCGGACAGGAAGGATCTGACTGCCGATGCACAGGAGCTGAAAGGGGAGCTATACTGCCTGCCATGCCATGA
Amino sequence
MAFSGRARPCIIPENEEIPRAALNTVHEANGTEDERAVSKLQRRHSDVKVYKEFCDFYAKFNMANALASATCERCKGGFAPAETIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGQEGSDCRCTGAERGAILPAMP*