ENST00000640669.1 LIMS3-LOC440895

Information
Transcript ID
ENST00000640669.1
Genome
hg38
Position
chr2:109,898,432-109,968,557
Strand
+
CDS length
747
Amino acid length
249
Gene symbol
LIMS3-LOC440895
Gene type
ncRNA
Gene description
LIMS3-LOC440895 readthrough
Gene Entrez Gene ID
100271835
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 109,898,432 109,898,910
2 109,903,253 109,903,412
3 109,914,411 109,914,477
4 109,915,952 109,916,072
5 109,916,507 109,916,656
6 109,919,489 109,919,643
7 109,920,254 109,920,346
8 109,921,640 109,921,688
9 109,924,348 109,924,423
10 109,933,088 109,933,205
11 109,934,812 109,934,894
12 109,936,178 109,936,338
13 109,936,719 109,936,943
14 109,937,975 109,938,072
15 109,947,364 109,947,845
16 109,963,469 109,963,550
17 109,964,688 109,964,802
18 109,968,070 109,968,557
CDS
Exon number Type Start Stop
1 CDS 109,898,729 109,898,910
2 CDS 109,903,253 109,903,412
3 CDS 109,914,411 109,914,477
4 CDS 109,915,952 109,916,072
5 CDS 109,916,507 109,916,656
6 CDS 109,919,489 109,919,555
Other genome
Genome Chromosome Start End Links
hg19 chr2 110,656,009 110,726,134 Link
CDS sequence
ATGGCCTTCTCAGGCCGAGCGCGCCCCTGCATTATCCCAGAGAACGAAGAAATCCCCCGAGCAGCCCTTAACACTGTCCACGAGGCCAATGGGACCGAGGACGAGAGGGCTGTTTCCAAACTGCAGCGCAGGCACAGTGACGTGAAAGTCTACAAGGAGTTCTGTGACTTTTATGCGAAATTCAACATGGCCAACGCCCTGGCCAGCGCCACTTGCGAGCGCTGCAAGGGCGGCTTTGCGCCCGCTGAGACGATCGTGAACAGTAATGGGGAGCTGTACCATGAGCAGTGTTTCGTGTGCGCTCAGTGCTTCCAGCAGTTCCCAGAAGGACTCTTCTATGAGTTTGAAGGAAGAAAGTACTGTGAACATGACTTTCAGATGCTCTTTGCCCCTTGCTGTCATCAGTGTGGTGAATTCATCATTGGCCGAGTTATCAAAGCCATGAATAACAGCTGGCATCCGGAGTGCTTCCGCTGTGACCTCTGCCAGGAAGTTCTGGCAGATATCGGGTTTGTCAAGAATGCTGGGAGACACCTGTGTCGCCCCTGTCATAATCGTGAGAAAGCCAGAGGCCTTGGGAAATACATCTGCCAGAAATGCCATGCTATCATCGATGAGCAGCCTCTGATATTCAAGAACGACCCCTACCATCCAGACCATTTCAACTGCGCCAACTGCGGACAGGAAGGATCTGACTGCCGATGCACAGGAGCTGAAAGGGGAGCTATACTGCCTGCCATGCCATGA
Amino sequence
MAFSGRARPCIIPENEEIPRAALNTVHEANGTEDERAVSKLQRRHSDVKVYKEFCDFYAKFNMANALASATCERCKGGFAPAETIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGQEGSDCRCTGAERGAILPAMP*