ENST00000590842.5 TPGS2

Information
Transcript ID
ENST00000590842.5
Genome
hg38
Position
chr18:36,786,573-36,828,842
Strand
-
CDS length
915
Amino acid length
305
Gene symbol
TPGS2
Gene type
protein-coding
Gene description
tubulin polyglutamylase complex subunit 2
Gene Entrez Gene ID
25941
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
7 36,786,573 36,787,079
6 36,798,449 36,798,609
5 36,800,198 36,800,311
4 36,805,374 36,805,502
3 36,807,847 36,807,934
2 36,818,894 36,818,973
1 36,828,683 36,828,842
CDS
Exon number Type Start Stop
7 CDS 36,786,822 36,787,079
6 CDS 36,798,449 36,798,609
5 CDS 36,800,198 36,800,311
4 CDS 36,805,374 36,805,502
3 CDS 36,807,847 36,807,934
2 CDS 36,818,894 36,818,973
1 CDS 36,828,683 36,828,767
Other genome
Genome Chromosome Start End Links
hg19 chr18 34,366,536 34,408,805 Link
CDS sequence
ATGGAGGAGGAGGCATCGTCCCCGGGGCTGGGCTGCAGCAAGCCGCACCTGGAGAAGCTGACCCTGGGCATCACGCGCATCCTAGAATCTTCCCCAGGTGTGACTGAGGTGACCATCATAGAAAAGCCTCCTGCTGAACGTCATATGATTTCTTCCTGGGAACAAAAGAATAACTGTGTGATGCCTGAAGATGTGAAGAACTTTTACCTGATGACCAATGGCTTCCACATGACATGGAGTGTGAAGCTGGATGAGCACATCATTCCACTGGGAAGCATGGCAATTAACAGCATCTCAAAACTGACTCAGCTCACCCAGTCTTCCATGTATTCACTTCCTAATGCACCCACTCTGGCAGACCTGGAGGACGATACACATGAAGCCAGTGATGATCAGCCAGAGAAGCCTCACTTTGACTCTCGCAGTGTGATATTTGAGCTGGATTCATGCAATGGCAGTGGGAAAGTTTGCCTTGTCTACAAAAGTGGGAAACCAGCATTAGCAGAAGACACTGAGATCTGGTTCCTGGACAGAGCGTTATACTGGCATTTTCTCACAGACACCTTTACTGCCTATTACCGCCTGCTCATCACCCACCTGGGCCTGCCCCAGTGGCAATATGCCTTCACCAGCTATGGCATTAGCCCACAGGCCAAGATAACTTATAATATCAAAATGAATAGAAGAAAATGTGTTCACTGGAAACTGGCTGTTGAGCCCCTCCAATGGGAGCTGAGGAGCTGTGTCTCTGCAGGCATGGGGACTGGCCACAAGCAAAGAGTCAGCAGCATGAAGCCCCGGAGCTGTAGCGTGTGCAGCAGGCGCCAATCCAACAGCATGGGAACAACAGTGTCGCAATCATTCCTCAGTTATGGCAAGAATGTGCTATTTTTCACTGTTAGGTGTTGCTTCTGA
Amino sequence
MEEEASSPGLGCSKPHLEKLTLGITRILESSPGVTEVTIIEKPPAERHMISSWEQKNNCVMPEDVKNFYLMTNGFHMTWSVKLDEHIIPLGSMAINSISKLTQLTQSSMYSLPNAPTLADLEDDTHEASDDQPEKPHFDSRSVIFELDSCNGSGKVCLVYKSGKPALAEDTEIWFLDRALYWHFLTDTFTAYYRLLITHLGLPQWQYAFTSYGISPQAKITYNIKMNRRKCVHWKLAVEPLQWELRSCVSAGMGTGHKQRVSSMKPRSCSVCSRRQSNSMGTTVSQSFLSYGKNVLFFTVRCCF*