ENST00000646925.1 CLEC20A
Information
- Transcript ID
- ENST00000646925.1
- Genome
- hg19
- Position
- chr1:178,448,382-178,456,056
- Strand
- -
- CDS length
- 669
- Amino acid length
- 223
- Gene symbol
- CLEC20A
- Gene type
- protein-coding
- Gene description
- C-type lectin domain containing 20A
- Gene Entrez Gene ID
- 400797
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 4 | 178,448,382 | 178,448,750 |
| 3 | 178,451,447 | 178,451,532 |
| 2 | 178,452,310 | 178,452,417 |
| 1 | 178,455,569 | 178,456,056 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 4 | CDS | 178,448,670 | 178,448,750 |
| 3 | CDS | 178,451,447 | 178,451,532 |
| 2 | CDS | 178,452,310 | 178,452,417 |
| 1 | CDS | 178,455,569 | 178,455,962 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr1 | 178,479,247 | 178,486,921 | Link |
CDS sequence
ATGCCGCCGGTCACTGCCCAGAGTGCGTCTTCCCACCCTGCGCCCTCGGCGTCCCAGCCCTCCAGCCCTGCTGCGGCCTCTCGGGGGAGCCTCTCTGTCCCCCAGGAAGTAACTGCGACTCTTCTGGCCTCCGCTTCGAGCCCCACACTCGATGCCACCCGCGATGCCCCAGCTACTCCCAGGATAGCAGCACCCCCTGGGTCTGCCACATCCAGCCGGGGCCTCGGCTCCCAGGCTCAAGGGAGCTCTCTGGGGACCAAAGAAAGCATCTCGGACTCATTTGGCTTAGGGAGCCCAGCCGTGACCCAGAGGACAACTGCACCCCCTGACTCTGCAGCCCTGAGCCAAGACACCCGCCCAGAGGCAGCTGGGAGCTGGCCAGGGCCCCAAACAGCTGTGGCCAGTGTAGGGAGTGGCACTGATAGAAGAGATACAGCTGCTGCCACGGAGGCCCAACATCTGAGTTCAGAATCTAAAGAAAAAACATCAGCACAAAAATCAGGGCACCCTTTTGGAATCTTGAAAGCAGACTTTACCATCTCAACTCTGATGGACCCAGAAGAGATGAAAGACCAATTTCTGAGACAGATCCAGGAAGTCTTAAAGCTTACATTAGGTCACGAACAATTTAGACTGAAATGGGTCAGCTTCGAAGTGAACAAAAAATAG
Amino sequence
MPPVTAQSASSHPAPSASQPSSPAAASRGSLSVPQEVTATLLASASSPTLDATRDAPATPRIAAPPGSATSSRGLGSQAQGSSLGTKESISDSFGLGSPAVTQRTTAPPDSAALSQDTRPEAAGSWPGPQTAVASVGSGTDRRDTAAATEAQHLSSESKEKTSAQKSGHPFGILKADFTISTLMDPEEMKDQFLRQIQEVLKLTLGHEQFRLKWVSFEVNKK*