ENST00000361813.5 SMG5

Information
Transcript ID
ENST00000361813.5
Genome
hg19
Position
chr1:156,219,015-156,252,616
Strand
-
CDS length
3,051
Amino acid length
1,017
Gene symbol
SMG5
Gene type
protein-coding
Gene description
SMG5 nonsense mediated mRNA decay factor
Gene Entrez Gene ID
23381
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
22 156,219,015 156,220,461
21 156,220,649 156,220,787
20 156,221,194 156,221,268
19 156,222,205 156,222,295
18 156,222,710 156,222,869
17 156,223,240 156,223,299
16 156,228,796 156,228,954
15 156,230,242 156,230,417
14 156,231,124 156,231,199
13 156,233,186 156,233,361
12 156,235,572 156,236,171
11 156,236,332 156,236,469
10 156,237,261 156,237,469
9 156,237,906 156,237,974
8 156,238,081 156,238,206
7 156,242,111 156,242,189
6 156,243,152 156,243,241
5 156,244,388 156,244,477
4 156,246,876 156,247,032
3 156,247,716 156,247,839
2 156,248,727 156,248,825
1 156,252,398 156,252,616
CDS
Exon number Type Start Stop
22 CDS 156,220,378 156,220,461
21 CDS 156,220,649 156,220,787
20 CDS 156,221,194 156,221,268
19 CDS 156,222,205 156,222,295
18 CDS 156,222,710 156,222,869
17 CDS 156,223,240 156,223,299
16 CDS 156,228,796 156,228,954
15 CDS 156,230,242 156,230,417
14 CDS 156,231,124 156,231,199
13 CDS 156,233,186 156,233,361
12 CDS 156,235,572 156,236,171
11 CDS 156,236,332 156,236,469
10 CDS 156,237,261 156,237,469
9 CDS 156,237,906 156,237,974
8 CDS 156,238,081 156,238,206
7 CDS 156,242,111 156,242,189
6 CDS 156,243,152 156,243,241
5 CDS 156,244,388 156,244,477
4 CDS 156,246,876 156,247,032
3 CDS 156,247,716 156,247,839
2 CDS 156,248,727 156,248,825
1 CDS 156,252,398 156,252,471
Other genome
Genome Chromosome Start End Links
hg38 chr1 156,249,224 156,282,825 Link
CDS sequence
ATGAGCCAAGGCCCCCCCACAGGGGAGAGCAGCGAGCCCGAAGCAAAAGTCCTCCACACTAAGCGGCTTTACCGGGCTGTGGTGGAGGCTGTGCATCGACTTGACCTCATCCTTTGCAACAAAACTGCTTATCAAGAAGTATTCAAACCAGAAAACATTAGCCTGAGGAACAAGCTGCGTGAGCTCTGCGTCAAGCTTATGTTCCTGCACCCAGTGGACTATGGGAGAAAGGCTGAGGAGCTGCTGTGGAGAAAGGTATACTATGAAGTTATCCAGCTTATCAAGACTAACAAAAAGCACATCCACAGCCGGAGCACTTTGGAATGTGCCTACAGGACGCACCTGGTTGCTGGTATTGGCTTCTACCAGCATCTCCTTCTCTATATCCAGTCCCACTACCAGCTGGAACTGCAGTGCTGCATCGACTGGACCCATGTCACTGACCCCCTCATAGGATGCAAGAAGCCAGTGTCTGCCTCAGGGAAGGAGATGGATTGGGCACAGATGGCATGTCACCGATGTCTGGTGTATCTGGGGGATTTGTCCCGATATCAGAATGAATTAGCTGGCGTAGATACCGAGCTGCTAGCCGAGAGATTTTACTACCAAGCCCTGTCAGTAGCTCCTCAGATTGGAATGCCCTTCAATCAGCTGGGCACCCTGGCAGGCAGCAAGTACTATAATGTGGAAGCCATGTATTGCTACCTGCGCTGCATCCAGTCAGAAGTGTCCTTTGAGGGAGCCTATGGGAACCTCAAGCGGCTGTATGACAAGGCAGCCAAAATGTACCACCAACTGAAGAAGTGTGAGACTCGGAAACTGTCTCCTGGCAAAAAGCGATGTAAAGACATTAAAAGGTTGCTAGTGAACTTTATGTATCTGCAAAGCCTCCTACAGCCCAAAAGCAGCTCCGTGGACTCAGAGCTGACCTCACTTTGCCAGTCAGTCCTGGAGGACTTCAACCTCTGCCTCTTCTACCTGCCCTCCTCACCCAACCTCAGCCTGGCCAGTGAGGATGAGGAGGAGTATGAGAGTGGATATGCTTTCCTCCCGGACCTTCTCATCTTTCAAATGGTCATCATCTGCCTTATGTGTGTGCACAGCTTGGAGAGAGCAGGATCCAAGCAGTACAGTGCAGCCATTGCCTTCACCCTGGCCCTCTTTTCCCACCTCGTCAATCATGTCAACATACGGCTGCAGGCTGAGCTGGAAGAGGGCGAGAATCCCGTCCCGGCATTCCAGAGTGATGGCACAGATGAACCAGAGTCCAAGGAACCTGTGGAGAAAGAGGAGGAGCCAGATCCTGAGCCTCCTCCTGTAACACCCCAAGTGGGTGAGGGCAGAAAGAGCCGTAAGTTCTCTCGCCTCTCCTGTCTCCGCCGTCGCCGCCACCCACCCAAAGTTGGTGATGACAGTGACCTGAGTGAAGGCTTTGAATCGGACTCAAGCCATGACTCAGCCCGGGCCAGTGAGGGCTCAGACAGTGGCTCTGACAAGAGTCTTGAAGGTGGGGGAACGGCCTTTGATGCTGAAACAGACTCGGAAATGAATAGCCAGGAGTCCCGATCAGACTTGGAAGATATGGAGGAAGAGGAGGGGACACGGTCACCAACCCTGGAGCCCCCTCGGGGCAGATCAGAGGCTCCCGATTCCCTCAATGGCCCACTGGGCCCCAGTGAGGCTAGCATTGCCAGCAATCTACAAGCCATGTCCACCCAGATGTTCCAGACTAAGCGCTGCTTCCGACTGGCCCCCACCTTTAGCAACCTGCTCCTCCAGCCCACCACCAACCCTCATACCTCGGCCAGCCACAGGCCTTGCGTCAATGGGGATGTAGACAAGCCTTCAGAGCCAGCCTCTGAGGAGGGCTCTGAGTCGGAGGGGAGTGAGTCCAGTGGACGCTCCTGTCGGAATGAGCGCAGCATCCAGGAGAAGCTTCAGGTCCTGATGGCCGAAGGTCTGCTTCCTGCTGTGAAAGTCTTCCTGGACTGGCTTCGGACCAACCCCGACCTCATCATCGTGTGTGCGCAGAGCTCTCAAAGTCTGTGGAACCGCCTGTCTGTGTTGCTGAATCTGTTGCCTGCTGCTGGTGAACTCCAGGAGTCTGGCCTGGCCTTGTGTCCTGAGGTCCAAGATCTTCTTGAAGGTTGTGAACTGCCTGACCTCCCCTCTAGCCTTCTGCTCCCAGAGGACATGGCTCTTCGTAACCTGCCCCCGCTCCGAGCTGCCCACAGACGCTTTAACTTTGACACGGATCGGCCCCTGCTCAGCACCTTAGAGGAGTCAGTGGTGCGCATCTGCTGCATCCGCAGCTTTGGTCATTTCATCGCCCGCCTGCAAGGCAGCATCCTGCAGTTCAACCCAGAGGTTGGCATCTTCGTCAGCATTGCCCAGTCTGAGCAGGAGAGCCTGCTGCAGCAGGCCCAGGCACAGTTCCGAATGGCACAGGAGGAAGCTCGTCGGAACAGGCTCATGAGAGACATGGCTCAGCTACGACTTCAGCTCGAAGTGTCTCAGCTGGAGGGCAGCCTGCAGCAGCCCAAGGCCCAGTCAGCCATGTCTCCCTACCTCGTCCCTGACACCCAGGCCCTCTGCCACCATCTCCCTGTCATCCGCCAACTGGCCACCAGTGGCCGCTTCATTGTCATCATCCCAAGGACAGTGATCGATGGCCTGGATTTGCTGAAGAAGGAACACCCAGGGGCCCGGGATGGGATTCGGTACCTGGAGGCAGAGTTTAAAAAAGGAAACAGGTACATTCGCTGCCAGAAAGAGGTGGGAAAGAGCTTTGAGCGGCATAAGCTGAAGAGGCAGGATGCAGATGCCTGGACTCTCTATAAGATCCTAGACAGCTGCAAACAGCTGACTCTGGCCCAGGGGGCAGGTGAGGAGGATCCGAGTGGCATGGTGACCATCATCACAGGCCTTCCACTGGACAACCCCAGCGTGCTTTCAGGCCCCATGCAGGCAGCCCTGCAGGCCGCTGCCCACGCCAGTGTGGACATCAAGAATGTTCTGGACTTCTACAAGCAGTGGAAGGAAATTGGTTGA
Amino sequence
MSQGPPTGESSEPEAKVLHTKRLYRAVVEAVHRLDLILCNKTAYQEVFKPENISLRNKLRELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGIGFYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASGKEMDWAQMACHRCLVYLGDLSRYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEAMYCYLRCIQSEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPGKKRCKDIKRLLVNFMYLQSLLQPKSSSVDSELTSLCQSVLEDFNLCLFYLPSSPNLSLASEDEEEYESGYAFLPDLLIFQMVIICLMCVHSLERAGSKQYSAAIAFTLALFSHLVNHVNIRLQAELEEGENPVPAFQSDGTDEPESKEPVEKEEEPDPEPPPVTPQVGEGRKSRKFSRLSCLRRRRHPPKVGDDSDLSEGFESDSSHDSARASEGSDSGSDKSLEGGGTAFDAETDSEMNSQESRSDLEDMEEEEGTRSPTLEPPRGRSEAPDSLNGPLGPSEASIASNLQAMSTQMFQTKRCFRLAPTFSNLLLQPTTNPHTSASHRPCVNGDVDKPSEPASEEGSESEGSESSGRSCRNERSIQEKLQVLMAEGLLPAVKVFLDWLRTNPDLIIVCAQSSQSLWNRLSVLLNLLPAAGELQESGLALCPEVQDLLEGCELPDLPSSLLLPEDMALRNLPPLRAAHRRFNFDTDRPLLSTLEESVVRICCIRSFGHFIARLQGSILQFNPEVGIFVSIAQSEQESLLQQAQAQFRMAQEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCHHLPVIRQLATSGRFIVIIPRTVIDGLDLLKKEHPGARDGIRYLEAEFKKGNRYIRCQKEVGKSFERHKLKRQDADAWTLYKILDSCKQLTLAQGAGEEDPSGMVTIITGLPLDNPSVLSGPMQAALQAAAHASVDIKNVLDFYKQWKEIG*