ENST00000361813.5 SMG5

Information
Transcript ID
ENST00000361813.5
Genome
hg38
Position
chr1:156,249,224-156,282,825
Strand
-
CDS length
3,051
Amino acid length
1,017
Gene symbol
SMG5
Gene type
protein-coding
Gene description
SMG5 nonsense mediated mRNA decay factor
Gene Entrez Gene ID
23381
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
22 156,249,224 156,250,670
21 156,250,858 156,250,996
20 156,251,403 156,251,477
19 156,252,414 156,252,504
18 156,252,919 156,253,078
17 156,253,449 156,253,508
16 156,259,005 156,259,163
15 156,260,451 156,260,626
14 156,261,333 156,261,408
13 156,263,395 156,263,570
12 156,265,781 156,266,380
11 156,266,541 156,266,678
10 156,267,470 156,267,678
9 156,268,115 156,268,183
8 156,268,290 156,268,415
7 156,272,320 156,272,398
6 156,273,361 156,273,450
5 156,274,597 156,274,686
4 156,277,085 156,277,241
3 156,277,925 156,278,048
2 156,278,936 156,279,034
1 156,282,607 156,282,825
CDS
Exon number Type Start Stop
22 CDS 156,250,587 156,250,670
21 CDS 156,250,858 156,250,996
20 CDS 156,251,403 156,251,477
19 CDS 156,252,414 156,252,504
18 CDS 156,252,919 156,253,078
17 CDS 156,253,449 156,253,508
16 CDS 156,259,005 156,259,163
15 CDS 156,260,451 156,260,626
14 CDS 156,261,333 156,261,408
13 CDS 156,263,395 156,263,570
12 CDS 156,265,781 156,266,380
11 CDS 156,266,541 156,266,678
10 CDS 156,267,470 156,267,678
9 CDS 156,268,115 156,268,183
8 CDS 156,268,290 156,268,415
7 CDS 156,272,320 156,272,398
6 CDS 156,273,361 156,273,450
5 CDS 156,274,597 156,274,686
4 CDS 156,277,085 156,277,241
3 CDS 156,277,925 156,278,048
2 CDS 156,278,936 156,279,034
1 CDS 156,282,607 156,282,680
Other genome
Genome Chromosome Start End Links
hg19 chr1 156,219,015 156,252,616 Link
CDS sequence
ATGAGCCAAGGCCCCCCCACAGGGGAGAGCAGCGAGCCCGAAGCAAAAGTCCTCCACACTAAGCGGCTTTACCGGGCTGTGGTGGAGGCTGTGCATCGACTTGACCTCATCCTTTGCAACAAAACTGCTTATCAAGAAGTATTCAAACCAGAAAACATTAGCCTGAGGAACAAGCTGCGTGAGCTCTGCGTCAAGCTTATGTTCCTGCACCCAGTGGACTATGGGAGAAAGGCTGAGGAGCTGCTGTGGAGAAAGGTATACTATGAAGTTATCCAGCTTATCAAGACTAACAAAAAGCACATCCACAGCCGGAGCACTTTGGAATGTGCCTACAGGACGCACCTGGTTGCTGGTATTGGCTTCTACCAGCATCTCCTTCTCTATATCCAGTCCCACTACCAGCTGGAACTGCAGTGCTGCATCGACTGGACCCATGTCACTGACCCCCTCATAGGATGCAAGAAGCCAGTGTCTGCCTCAGGGAAGGAGATGGATTGGGCACAGATGGCATGTCACCGATGTCTGGTGTATCTGGGGGATTTGTCCCGATATCAGAATGAATTAGCTGGCGTAGATACCGAGCTGCTAGCCGAGAGATTTTACTACCAAGCCCTGTCAGTAGCTCCTCAGATTGGAATGCCCTTCAATCAGCTGGGCACCCTGGCAGGCAGCAAGTACTATAATGTGGAAGCCATGTATTGCTACCTGCGCTGCATCCAGTCAGAAGTGTCCTTTGAGGGAGCCTATGGGAACCTCAAGCGGCTGTATGACAAGGCAGCCAAAATGTACCACCAACTGAAGAAGTGTGAGACTCGGAAACTGTCTCCTGGCAAAAAGCGATGTAAAGACATTAAAAGGTTGCTAGTGAACTTTATGTATCTGCAAAGCCTCCTACAGCCCAAAAGCAGCTCCGTGGACTCAGAGCTGACCTCACTTTGCCAGTCAGTCCTGGAGGACTTCAACCTCTGCCTCTTCTACCTGCCCTCCTCACCCAACCTCAGCCTGGCCAGTGAGGATGAGGAGGAGTATGAGAGTGGATATGCTTTCCTCCCGGACCTTCTCATCTTTCAAATGGTCATCATCTGCCTTATGTGTGTGCACAGCTTGGAGAGAGCAGGATCCAAGCAGTACAGTGCAGCCATTGCCTTCACCCTGGCCCTCTTTTCCCACCTCGTCAATCATGTCAACATACGGCTGCAGGCTGAGCTGGAAGAGGGCGAGAATCCCGTCCCGGCATTCCAGAGTGATGGCACAGATGAACCAGAGTCCAAGGAACCTGTGGAGAAAGAGGAGGAGCCAGATCCTGAGCCTCCTCCTGTAACACCCCAAGTGGGTGAGGGCAGAAAGAGCCGTAAGTTCTCTCGCCTCTCCTGTCTCCGCCGTCGCCGCCACCCACCCAAAGTTGGTGATGACAGTGACCTGAGTGAAGGCTTTGAATCGGACTCAAGCCATGACTCAGCCCGGGCCAGTGAGGGCTCAGACAGTGGCTCTGACAAGAGTCTTGAAGGTGGGGGAACGGCCTTTGATGCTGAAACAGACTCGGAAATGAATAGCCAGGAGTCCCGATCAGACTTGGAAGATATGGAGGAAGAGGAGGGGACACGGTCACCAACCCTGGAGCCCCCTCGGGGCAGATCAGAGGCTCCCGATTCCCTCAATGGCCCACTGGGCCCCAGTGAGGCTAGCATTGCCAGCAATCTACAAGCCATGTCCACCCAGATGTTCCAGACTAAGCGCTGCTTCCGACTGGCCCCCACCTTTAGCAACCTGCTCCTCCAGCCCACCACCAACCCTCATACCTCGGCCAGCCACAGGCCTTGCGTCAATGGGGATGTAGACAAGCCTTCAGAGCCAGCCTCTGAGGAGGGCTCTGAGTCGGAGGGGAGTGAGTCCAGTGGACGCTCCTGTCGGAATGAGCGCAGCATCCAGGAGAAGCTTCAGGTCCTGATGGCCGAAGGTCTGCTTCCTGCTGTGAAAGTCTTCCTGGACTGGCTTCGGACCAACCCCGACCTCATCATCGTGTGTGCGCAGAGCTCTCAAAGTCTGTGGAACCGCCTGTCTGTGTTGCTGAATCTGTTGCCTGCTGCTGGTGAACTCCAGGAGTCTGGCCTGGCCTTGTGTCCTGAGGTCCAAGATCTTCTTGAAGGTTGTGAACTGCCTGACCTCCCCTCTAGCCTTCTGCTCCCAGAGGACATGGCTCTTCGTAACCTGCCCCCGCTCCGAGCTGCCCACAGACGCTTTAACTTTGACACGGATCGGCCCCTGCTCAGCACCTTAGAGGAGTCAGTGGTGCGCATCTGCTGCATCCGCAGCTTTGGTCATTTCATCGCCCGCCTGCAAGGCAGCATCCTGCAGTTCAACCCAGAGGTTGGCATCTTCGTCAGCATTGCCCAGTCTGAGCAGGAGAGCCTGCTGCAGCAGGCCCAGGCACAGTTCCGAATGGCACAGGAGGAAGCTCGTCGGAACAGGCTCATGAGAGACATGGCTCAGCTACGACTTCAGCTCGAAGTGTCTCAGCTGGAGGGCAGCCTGCAGCAGCCCAAGGCCCAGTCAGCCATGTCTCCCTACCTCGTCCCTGACACCCAGGCCCTCTGCCACCATCTCCCTGTCATCCGCCAACTGGCCACCAGTGGCCGCTTCATTGTCATCATCCCAAGGACAGTGATCGATGGCCTGGATTTGCTGAAGAAGGAACACCCAGGGGCCCGGGATGGGATTCGGTACCTGGAGGCAGAGTTTAAAAAAGGAAACAGGTACATTCGCTGCCAGAAAGAGGTGGGAAAGAGCTTTGAGCGGCATAAGCTGAAGAGGCAGGATGCAGATGCCTGGACTCTCTATAAGATCCTAGACAGCTGCAAACAGCTGACTCTGGCCCAGGGGGCAGGTGAGGAGGATCCGAGTGGCATGGTGACCATCATCACAGGCCTTCCACTGGACAACCCCAGCGTGCTTTCAGGCCCCATGCAGGCAGCCCTGCAGGCCGCTGCCCACGCCAGTGTGGACATCAAGAATGTTCTGGACTTCTACAAGCAGTGGAAGGAAATTGGTTGA
Amino sequence
MSQGPPTGESSEPEAKVLHTKRLYRAVVEAVHRLDLILCNKTAYQEVFKPENISLRNKLRELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGIGFYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASGKEMDWAQMACHRCLVYLGDLSRYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEAMYCYLRCIQSEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPGKKRCKDIKRLLVNFMYLQSLLQPKSSSVDSELTSLCQSVLEDFNLCLFYLPSSPNLSLASEDEEEYESGYAFLPDLLIFQMVIICLMCVHSLERAGSKQYSAAIAFTLALFSHLVNHVNIRLQAELEEGENPVPAFQSDGTDEPESKEPVEKEEEPDPEPPPVTPQVGEGRKSRKFSRLSCLRRRRHPPKVGDDSDLSEGFESDSSHDSARASEGSDSGSDKSLEGGGTAFDAETDSEMNSQESRSDLEDMEEEEGTRSPTLEPPRGRSEAPDSLNGPLGPSEASIASNLQAMSTQMFQTKRCFRLAPTFSNLLLQPTTNPHTSASHRPCVNGDVDKPSEPASEEGSESEGSESSGRSCRNERSIQEKLQVLMAEGLLPAVKVFLDWLRTNPDLIIVCAQSSQSLWNRLSVLLNLLPAAGELQESGLALCPEVQDLLEGCELPDLPSSLLLPEDMALRNLPPLRAAHRRFNFDTDRPLLSTLEESVVRICCIRSFGHFIARLQGSILQFNPEVGIFVSIAQSEQESLLQQAQAQFRMAQEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCHHLPVIRQLATSGRFIVIIPRTVIDGLDLLKKEHPGARDGIRYLEAEFKKGNRYIRCQKEVGKSFERHKLKRQDADAWTLYKILDSCKQLTLAQGAGEEDPSGMVTIITGLPLDNPSVLSGPMQAALQAAAHASVDIKNVLDFYKQWKEIG*