ENST00000488454.5 SKA1

Information
Transcript ID
ENST00000488454.5
Genome
hg38
Position
chr18:50,375,046-50,392,251
Strand
+
CDS length
315
Amino acid length
105
Gene symbol
SKA1
Gene type
protein-coding
Gene description
spindle and kinetochore associated complex subunit 1
Gene Entrez Gene ID
220134
Variants

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MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 50,375,046 50,375,194
2 50,375,820 50,375,918
3 50,382,129 50,382,226
4 50,391,124 50,391,293
5 50,392,099 50,392,251
CDS
Exon number Type Start Stop
4 CDS 50,391,128 50,391,293
5 CDS 50,392,099 50,392,247
Other genome
Genome Chromosome Start End Links
hg19 chr18 47,901,416 47,918,621 Link
CDS sequence
ATGAAATCCCGCTTAACCTATAATCAAATTAATGATGTTATTAAAGAAATCAACAAGGCAGTAATTAGTAAATATAAAATCCTACATCAGCCAAAAAAGTCTATGAATTCTGTGACCAGAAATCTCTATCACAGATTTATTGATGAAGAAACGAAGGATACCAAAGGTCGTTATTTTATAGTGGAAGCTGACATAAAGGAGTTCACAACTTTGAAAGCTGACAAGAAGTTTCACGTGTTACTGAATATTTTACGACACTGCCGGAGGCTATCAGAGGTCCGAGGGGGAGGACTTACTCGTTATGTTATAACCTGA
Amino sequence
MKSRLTYNQINDVIKEINKAVISKYKILHQPKKSMNSVTRNLYHRFIDEETKDTKGRYFIVEADIKEFTTLKADKKFHVLLNILRHCRRLSEVRGGGLTRYVIT*