ENST00000309894.6 CSHL1

Information
Transcript ID
ENST00000309894.6
Genome
hg38
Position
chr17:63,909,608-63,911,258
Strand
-
CDS length
669
Amino acid length
223
Gene symbol
CSHL1
Gene type
protein-coding
Gene description
chorionic somatomammotropin hormone like 1
Gene Entrez Gene ID
1444
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 63,909,608 63,909,908
4 63,910,162 63,910,326
3 63,910,420 63,910,535
2 63,910,745 63,910,924
1 63,911,187 63,911,258
CDS
Exon number Type Start Stop
5 CDS 63,909,711 63,909,908
4 CDS 63,910,162 63,910,326
3 CDS 63,910,420 63,910,535
2 CDS 63,910,745 63,910,924
1 CDS 63,911,187 63,911,196
Other genome
Genome Chromosome Start End Links
hg19 chr17 61,986,968 61,988,618 Link
CDS sequence
ATGGCTGCAGGCTCCCGGACGTCCCTGCTCCTGGCTTTTGCCCTGCTCTGCCTGCCCTGGCTTCAAGAGGCTGGTGCCGTCCAAACCGTTCCCTTATCCAGGCTTTTTAAAGAGGCTATGCTCCAAGCCCATCGCGCACACCAGCTGGCCATTGACACCTACCAGGAGTTTATAAGCTCTTGGGGAATGGAAGCCTATATCACAAAGGAACAGAAGTATTCATTCCTGCATGACTCCCAGACCTCCTTCTGCTTCTCAGACTCTATTCCGACATCCTCCAACATGGAGGAAACGCAGCAGAAATCCAACTTAGAGCTGCTCCACATCTCCCTGCTGCTCATCGAGTCGCGGCTGGAGCCCGTGCGGTTCCTCAGGAGTACCTTCACCAACAACCTGGTGTATGACACCTCGGACAGCGATGACTATCACCTCCTAAAGGACCTAGAGGAAGGCATCCAAATGCTGATGGGGAGGCTGGAAGACGGCAGCCACCTGACTGGGCAGACCCTCAAGCAGACCTACAGCAAGTTTGACACAAACTCGCACAACCATGACGCACTGCTCAAGAACTACGGGCTGCTCCACTGCTTCAGGAAGGACATGGACAAGGTCGAGACATTCCTGCGCATGGTGCAGTGCCGCTCTGTGGAGGGCAGCTGTGGCTTCTAG
Amino sequence
MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFKEAMLQAHRAHQLAIDTYQEFISSWGMEAYITKEQKYSFLHDSQTSFCFSDSIPTSSNMEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQMLMGRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCRSVEGSCGF*