LHX1 LIM homeobox 1

Information
Symbol
LHX1
Type
protein-coding
Description
LIM homeobox 1
Entrez Gene ID
3975
Genome
hg19
Position
chr17:35,294,772-35,301,912
Genome
hg38
Position
chr17:36,937,475-36,944,612
MIM
601999 OMIM
HGNC
HGNC:6593 HGNC
Ensembl
ENSG00000273706 Ensembl
Links
NCBI Gene Cards OncoKB
Clinical Significance
MGeND ClinVar
Benign 0 8
Likely benign 0 16
not provided 1 0
Uncertain significance 0 28
Ranking
ClinVar
0
0
0
52
0
Frequency
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
EXAC_EAS
EXAC_EAS
HGVD
HGVD
TOMMO
TOMMO
Gene
Position
Disease area statistics
Locus Zoom
Variants
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
TypeID
SYNONYM LIM-1
SYNONYM LIM1
MIM 601999 OMIM
HGNC HGNC:6593 HGNC
Ensembl ENSG00000273706 Ensembl
AllianceGenome HGNC:6593
DescrptionSourceLinks
IDGenomeChromosomeStartEndLength
ENST00000614239.1 hg38 chr17 36,937,475 36,944,612 7,138
ENST00000614239.1 hg19 chr17 35,294,772 35,301,912 7,141
Genome browser