Annotation Detail

Information
Associated Genes
TNF
Associated Variants
LTA c.-9-198A>G ( ENST00000454783.5, ENST00000418386.3 )
TNF c.-488G>A
LTA c.-9-198A>G ( ENST00000418386.3, ENST00000454783.5 )
TNF c.-488G>A
Associated Disease
Lymphoma, Non-Hodgkin
Source Database
DisGeNET
Description
Two single nucleotide polymorphisms (SNPs) in adjacent genes, lymphotoxin alpha (LTA +252G, rs909253 A>G) and tumor necrosis factor (TNF -308A, rs1800629 G>A), form the G-A haplotype repeatedly associated with increased risk of non-Hodgkin lymphoma (NHL) in individuals uninfected with HIV-1.
Pubmed
19654554
Original source reporting the Gene Disease association
BeFree
DisGENET score for the Gene Disease association
0.0497499406807093
Year of publication
2009
Drugs