chr6:137519407:>ATTTCTGGAGTGATCACTCTCAGAACA Detail (hg19) (IFNGR1)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr6:137,519,407-137,519,407 |
| hg38 | chr6:137,198,270-137,198,270 |
HGVS
| Type | Transcript | Protein |
|---|---|---|
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
[No Data.]
Prediction
[No Data.]
ClinVar
| Clinical Significance | |
| Review star | [No Data.] |
| Show details | |
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
| Score | Disease name | Description | Source | Pubmed | Links |
|---|---|---|---|---|---|
| <0.001 | Malignant neoplasm of stomach | Association study of SNPs of genes IFNGR1 (rs137854905), GSTT1 (rs71748309), and... | BeFree | 24453034 | Detail |
| 0.005 | stomach carcinoma | Association study of SNPs of genes IFNGR1 (rs137854905), GSTT1 (rs71748309), and... | BeFree | 24453034 | Detail |
| 0.011 | stomach carcinoma | Association study of SNPs of genes IFNGR1 (rs137854905), GSTT1 (rs71748309), and... | BeFree | 24453034 | Detail |
| 0.034 | Malignant neoplasm of stomach | Association study of SNPs of genes IFNGR1 (rs137854905), GSTT1 (rs71748309), and... | BeFree | 24453034 | Detail |
| <0.001 | stomach carcinoma | Association study of SNPs of genes IFNGR1 (rs137854905), GSTT1 (rs71748309), and... | BeFree | 24453034 | Detail |
| 0.021 | Malignant neoplasm of stomach | Association study of SNPs of genes IFNGR1 (rs137854905), GSTT1 (rs71748309), and... | BeFree | 24453034 | Detail |
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| Association study of SNPs of genes IFNGR1 (rs137854905), GSTT1 (rs71748309), and GSTP1 (rs1695) in g... | DisGeNET | Detail |
| Association study of SNPs of genes IFNGR1 (rs137854905), GSTT1 (rs71748309), and GSTP1 (rs1695) in g... | DisGeNET | Detail |
| Association study of SNPs of genes IFNGR1 (rs137854905), GSTT1 (rs71748309), and GSTP1 (rs1695) in g... | DisGeNET | Detail |
| Association study of SNPs of genes IFNGR1 (rs137854905), GSTT1 (rs71748309), and GSTP1 (rs1695) in g... | DisGeNET | Detail |
| Association study of SNPs of genes IFNGR1 (rs137854905), GSTT1 (rs71748309), and GSTP1 (rs1695) in g... | DisGeNET | Detail |
| Association study of SNPs of genes IFNGR1 (rs137854905), GSTT1 (rs71748309), and GSTP1 (rs1695) in g... | DisGeNET | Detail |
Overlapped Transcript Coordinates
| Gene | Transcript ID | Exon Number | Chromosome | Start | Stop | Type | Amino Mutation | Transcript Position | Links |
|---|
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs137854905 dbSNP
- Genome
- hg19
- Position
- chr6:137,519,407-137,519,407
- Variant Type
- snv
- Reference Allele
- -
- Alternative Allele
- ATTTCTGGAGTGATCACTCTCAGAACA
Genome browser