chr9:134420982:T>C Detail (hg38) (RXRA)
Information
Genome
| Assembly | Position |
|---|---|
| hg19 | chr9:137,312,828-137,312,828 View the variant detail on this assembly version. |
| hg38 | chr9:134,420,982-134,420,982 |
HGVS
| Type | Transcript | Protein |
|---|---|---|
| RefSeq | NM_001291920.1:c.781-694T>C | |
| NM_001291921.1:c.781-694T>C | ||
| NM_002957.5:c.781-694T>C |
Summary
MGeND
| Clinical significance | |
| Variant entry | |
| GWAS entry | |
| Disease area statistics | Show details |
Frequency
| JP | HGVD:[No Data.] |
| ToMMo:0.099 | |
| NCBN:[No Data.] | |
| NCBN(Hondo):[No Data.] | |
| NCBN(Ryukyu):[No Data.] | |
| East asia | ExAC:[No Data.] |
Prediction
ClinVar
| Clinical Significance | |
| Review star | [No Data.] |
| Show details | |
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
Annotation
Annotations
| Descrption | Source | Links |
|---|---|---|
| A significant association was found between lower measles-specific IFN-γ Enzyme-linked immunosorbent... | DisGeNET | Detail |
| A significant association was found between lower measles-specific IFN-γ Enzyme-linked immunosorbent... | DisGeNET | Detail |
Overlapped Transcript
| Gene | Transcript ID | Chromosome | Start | Stop | Links |
|---|
- Gene
- -
- dbSNP
- rs6537944 dbSNP
- Genome
- hg38
- Position
- chr9:134,420,982-134,420,982
- Variant Type
- snv
- Reference Allele
- T
- Alternative Allele
- C
- ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- PASS
- Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- rs6537944
- Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 0.0987
- Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 1654
- Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
- 16760
Genome browser